Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004879.1 Hibiscus syriacus cultivar Beakdansim tig00010994_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30998

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1067--1113
18
2.5
19
77
19
53
25
25
17
31
1.97
963--1159
103
1.9
104
79
5
220
27
20
17
33
1.96
9347--9386
19
2.1
19
95
0
71
40
27
15
17
1.89
11243--11320
37
2.1
37
90
0
120
24
24
12
38
1.90
14491--14534
22
2.0
22
95
0
79
22
6
38
31
1.81
21039--21081
20
2.2
20
95
4
79
46
4
11
37
1.61
21995--22045
21
2.4
21
76
23
54
52
5
11
29
1.61
22999--23037
21
1.9
20
84
5
51
20
28
0
51
1.48
25029--25080
19
2.6
20
90
6
79
44
5
13
36
1.68
26911--26980
24
3.0
23
71
24
56
64
0
18
17
1.30

Tables:   1

The End!