Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000488.1 Hibiscus syriacus cultivar Beakdansim tig00000930_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49475

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4749--4801
3
18.0
3
84
11
65
39
0
0
60
0.97
4749--4810
21
2.8
22
85
9
81
43
0
0
56
0.99
8071--8124
14
3.8
14
82
4
63
24
14
9
51
1.71
11647--11701
26
2.1
27
96
3
103
69
10
14
5
1.35
11684--11740
20
2.9
19
89
7
80
84
0
14
1
0.71
11684--11741
13
4.3
13
80
6
62
82
0
15
1
0.74
11658--11721
27
2.4
26
82
7
74
79
4
12
3
1.00
11688--11740
10
5.3
10
82
8
72
84
0
13
1
0.69
11684--11740
28
2.0
29
83
10
73
84
0
14
1
0.71
15117--15308
76
2.5
76
94
1
332
36
16
15
30
1.90
16235--16392
54
3.0
54
80
6
182
38
14
21
25
1.91
17135--18607
227
6.5
226
92
1
2351
39
14
17
28
1.89
17135--18607
113
13.0
113
93
1
2340
39
14
17
28
1.89
18522--18750
120
1.9
119
84
9
311
38
15
21
24
1.92
18651--18709
17
3.4
17
70
25
59
49
11
23
15
1.77
18951--19011
3
20.0
3
93
6
97
36
0
0
63
0.94
23507--23536
2
15.0
2
100
0
60
50
0
0
50
1.00
25450--25504
21
2.8
19
79
12
58
36
3
0
60
1.15
25860--25899
16
2.5
16
87
0
53
12
5
25
57
1.55
39055--39111
15
3.6
16
76
19
57
42
12
0
45
1.41
44542--44586
17
2.6
17
79
6
56
40
0
13
46
1.43
44916--44998
36
2.3
36
85
8
123
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44943--45025
36
2.3
36
84
10
100
45
0
0
54
0.99
45064--45137
30
2.5
30
86
6
114
17
33
14
33
1.91
45976--46014
21
1.9
20
89
5
60
35
20
5
38
1.75
48377--48406
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!