Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004885.1 Hibiscus syriacus cultivar Beakdansim tig00011003_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45118

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
158--192
14
2.5
14
85
0
52
11
11
17
60
1.59
1478--1524
20
2.5
19
86
13
62
44
6
12
36
1.68
2427--2484
28
2.0
29
83
3
73
50
10
10
29
1.70
2799--2874
39
1.9
39
81
5
91
28
21
6
43
1.77
9208--9236
15
2.0
15
93
6
51
0
20
3
75
0.94
24480--24541
10
5.8
10
74
20
54
1
14
3
80
0.91
24485--24541
8
6.6
8
73
15
51
1
14
3
80
0.92
24493--24544
18
2.9
18
76
18
56
3
13
5
76
1.10
27283--27332
19
2.6
19
90
0
73
32
16
6
46
1.71
28124--28158
17
2.1
16
89
5
52
82
5
11
0
0.82
35048--35092
19
2.5
18
85
7
56
2
20
6
71
1.20
35032--35094
18
3.7
18
70
17
55
1
17
6
74
1.10
35360--35399
19
2.0
20
86
13
57
67
0
10
22
1.20
39797--41107
656
2.0
656
97
0
2478
37
11
22
27
1.89
45068--45100
15
2.1
17
88
11
52
63
0
12
24
1.28

Tables:   1

The End!