Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004888.1 Hibiscus syriacus cultivar Beakdansim tig00011007_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52201

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15389--15511
62
2.0
62
100
0
246
25
26
13
35
1.92
16694--16740
17
2.8
16
83
6
58
36
21
10
31
1.88
18600--18986
135
2.8
136
80
11
411
42
12
15
29
1.83
20915--20956
6
7.0
6
91
0
57
52
0
2
45
1.13
21222--21425
85
2.4
85
85
8
281
30
14
22
32
1.94
21224--21425
43
4.8
42
83
7
234
30
14
22
32
1.94
21435--21783
117
3.0
117
89
0
527
26
23
14
35
1.93
22570--22601
2
16.0
2
100
0
64
50
0
0
50
1.00
22764--22861
23
4.3
23
84
0
124
33
22
26
17
1.96
22764--22861
46
2.1
46
88
3
144
33
22
26
17
1.96
22938--23069
45
3.0
43
85
2
156
37
19
9
32
1.85
25849--25912
33
1.9
33
96
0
119
43
12
10
32
1.77
27428--27472
22
2.0
23
95
4
83
60
13
8
17
1.58
30249--30308
23
2.7
22
82
10
61
30
26
16
26
1.97
38439--38514
36
2.1
36
97
0
143
31
10
14
43
1.79
38932--38961
15
2.0
15
100
0
60
13
26
46
13
1.80
43434--43509
36
2.1
36
97
0
143
31
10
14
43
1.79
45713--45751
18
2.2
18
90
9
62
56
5
0
38
1.22
47102--47160
31
1.9
31
92
0
100
37
16
13
32
1.88
47598--47632
18
1.9
18
94
0
61
48
5
5
40
1.51
49743--49786
19
2.2
20
96
4
81
25
36
22
15
1.94
52047--52085
16
2.4
16
95
4
69
28
17
7
46
1.76

Tables:   1

The End!