Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004890.1 Hibiscus syriacus cultivar Beakdansim tig00011009_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64717

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5650--5683
17
2.0
17
100
0
68
5
23
52
17
1.66
6982--7033
20
2.6
20
87
0
68
25
21
19
34
1.96
9260--9316
25
2.2
25
87
3
78
33
24
15
26
1.95
11126--11221
28
3.4
30
77
12
96
43
6
6
43
1.54
11349--11428
29
2.7
30
81
11
94
50
6
2
41
1.41
11379--11438
28
2.1
29
84
3
77
56
5
5
33
1.42
14838--14871
12
2.8
12
100
0
68
26
23
17
32
1.97
14902--14952
18
2.8
18
100
0
102
27
31
17
23
1.97
14938--15044
45
2.4
45
92
6
173
28
20
17
33
1.96
20823--20879
24
2.6
21
74
15
60
29
22
19
28
1.98
20823--20920
45
2.2
44
82
15
114
28
21
21
28
1.99
21097--21134
19
2.0
20
84
5
51
42
23
7
26
1.81
23079--23116
20
1.9
20
88
0
58
26
26
21
26
1.99
23121--23271
64
2.4
63
86
5
207
31
21
15
31
1.95
23125--23295
64
2.7
62
81
9
193
29
22
15
32
1.95
28396--28433
20
1.9
20
88
0
58
26
26
21
26
1.99
28438--28588
64
2.4
63
86
5
207
31
21
15
31
1.95
28442--28612
64
2.7
62
81
9
193
29
22
15
32
1.95
33711--33748
20
1.9
20
88
0
58
26
26
21
26
1.99
33753--33903
64
2.4
63
86
5
207
31
21
15
31
1.95
33757--33927
64
2.7
62
81
9
193
29
22
15
32
1.95
39023--39060
20
1.9
20
88
0
58
26
26
21
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39065--39215
64
2.4
63
86
5
207
31
21
15
31
1.95
39069--39239
64
2.7
62
81
9
193
29
22
15
32
1.95
44311--44348
20
1.9
20
94
0
67
26
23
21
28
1.99
44312--44398
35
2.4
37
72
20
92
29
26
16
27
1.96
44357--44508
63
2.4
62
82
7
191
30
21
16
30
1.95
45219--45277
31
1.9
31
86
6
84
23
23
18
33
1.97
52605--52659
5
10.8
5
84
11
76
3
21
54
20
1.59
52598--52654
17
3.2
17
90
5
78
7
22
50
19
1.71
52604--52656
17
3.0
17
91
5
79
3
22
54
18
1.59
56590--56641
14
3.7
14
87
7
70
23
9
26
40
1.85
61489--61540
21
2.4
21
96
3
95
5
0
40
53
1.25

Tables:   1

The End!