Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004896.1 Hibiscus syriacus cultivar Beakdansim tig00011019_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50536

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
784--827
15
2.9
15
89
3
61
36
9
38
15
1.80
2573--2628
18
3.1
18
77
10
60
30
32
10
26
1.90
10620--10673
15
3.7
15
79
18
53
68
1
0
29
1.00
10632--10704
9
8.1
9
74
19
64
63
0
0
36
0.95
10632--10709
16
5.0
15
80
18
72
61
0
1
37
1.04
10639--10745
29
4.0
28
76
18
77
58
0
1
39
1.09
10632--10743
9
12.4
9
70
14
52
59
0
1
38
1.08
17881--17920
20
2.1
20
86
9
57
32
10
15
42
1.79
23307--23365
13
4.7
12
82
12
57
28
1
1
67
1.10
23285--23356
30
2.4
30
84
9
85
31
2
1
63
1.17
26003--26071
3
23.3
3
78
8
70
37
4
0
57
1.18
30086--30174
47
2.0
43
87
12
128
20
15
12
51
1.75
31896--33426
106
14.4
106
93
0
2497
33
24
18
23
1.96
31880--33426
318
4.9
318
96
0
2772
33
24
18
23
1.96
33480--33656
84
2.1
85
88
1
257
28
23
22
25
1.99
33885--33953
3
23.3
3
78
8
70
37
4
0
57
1.18
36965--36998
17
1.9
18
88
5
52
44
0
0
55
0.99
38669--38822
36
4.2
36
89
4
202
33
18
14
33
1.91
43969--44107
36
4.0
35
84
13
155
34
17
16
30
1.93
45513--45556
18
2.4
19
88
11
65
25
52
18
4
1.64

Tables:   1

The End!