Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004902.1 Hibiscus syriacus cultivar Beakdansim tig00011029_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63875

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
417--455
20
1.9
21
94
5
71
15
15
10
58
1.62
762--825
31
2.1
31
82
5
76
35
15
10
37
1.83
19286--19344
18
3.2
18
92
2
91
38
18
15
27
1.91
19374--19425
20
2.6
20
96
0
95
34
15
13
36
1.87
20535--20576
20
2.2
19
87
8
59
21
9
9
59
1.57
28523--28563
6
7.0
6
81
15
50
14
0
2
82
0.76
28523--28547
13
1.9
13
100
0
50
16
0
0
84
0.63
28532--28563
16
1.9
17
93
6
57
12
0
3
84
0.74
39973--39998
7
3.7
7
100
0
52
69
0
0
30
0.89
52115--52199
42
2.0
42
88
0
125
31
25
12
29
1.93
55071--55148
30
2.6
30
91
2
122
35
8
12
42
1.75
55073--55159
30
2.9
30
89
1
113
34
8
11
45
1.70
55080--55169
29
3.1
29
78
1
72
36
8
11
43
1.72
63703--63875
49
3.5
49
87
0
238
36
15
19
28
1.92

Tables:   1

The End!