Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004908.1 Hibiscus syriacus cultivar Beakdansim tig00011042_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53411

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11066--11098
5
6.6
5
96
0
57
78
18
3
0
0.87
18687--18722
3
12.0
3
100
0
72
33
0
0
66
0.92
21049--21177
63
2.0
63
98
0
249
25
18
18
37
1.94
22217--22417
71
2.8
71
96
0
359
32
31
3
32
1.75
30865--30920
16
3.4
16
76
9
60
69
7
0
23
1.12
32437--32484
24
2.0
24
83
0
60
41
2
6
50
1.39
32714--32775
30
2.2
28
86
13
85
43
19
19
17
1.88
35237--35275
2
19.5
2
83
0
51
48
5
2
43
1.38
35781--35906
63
2.0
63
90
0
198
35
17
22
24
1.95
37164--38007
105
8.0
105
97
0
1553
23
17
25
33
1.96
49923--50046
61
2.0
63
88
3
189
35
17
21
25
1.95
52886--52958
20
3.6
21
76
12
80
36
26
16
20
1.93
53102--53174
22
3.3
22
90
0
110
21
42
15
20
1.89

Tables:   1

The End!