Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004910.1 Hibiscus syriacus cultivar Beakdansim tig00011045_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94017

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4426--4548
48
2.5
49
80
4
131
23
27
31
17
1.97
4442--4548
48
2.2
49
83
3
135
21
28
33
15
1.94
8259--8382
60
2.1
60
85
0
167
33
19
18
29
1.96
8737--8779
21
2.0
21
86
8
61
48
16
0
34
1.46
18613--18725
3
37.7
3
95
0
190
65
1
0
31
1.09
18946--19284
131
2.5
132
80
3
367
26
15
30
27
1.96
20254--20329
10
7.0
11
80
12
61
3
15
0
80
0.86
20255--20372
21
5.8
21
67
18
79
5
16
0
77
1.00
20289--20336
23
2.1
22
92
3
78
6
16
0
77
0.97
20256--20368
50
2.2
50
80
13
133
5
16
0
76
1.01
20256--20363
12
8.6
12
71
18
69
5
15
0
77
1.00
20301--20336
11
3.2
11
84
7
54
5
16
0
77
0.94
20245--20365
30
4.1
30
72
22
87
5
16
1
76
1.07
20295--20345
23
2.2
23
82
6
59
9
15
0
74
1.06
27008--27070
30
2.1
30
93
0
108
34
7
19
38
1.81
31234--31269
5
6.8
5
96
3
54
63
0
16
19
1.30
39128--39165
16
2.4
16
90
0
58
57
26
0
15
1.38
40721--40765
23
2.0
23
81
0
54
26
24
26
22
2.00
42797--42875
23
3.6
22
86
8
99
25
22
29
22
1.99
48696--48738
21
2.0
21
95
0
77
13
20
44
20
1.86
50399--50426
2
14.0
2
100
0
56
50
0
0
50
1.00
53740--53764
2
12.5
2
100
0
50
52
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54274--54348
32
2.3
34
82
13
86
48
0
0
52
1.00
55747--55842
2
48.0
2
82
12
117
47
1
5
45
1.32
56138--56201
32
2.0
32
85
11
87
29
18
0
51
1.47
56251--56337
2
43.5
2
100
0
174
50
0
0
49
1.00
57321--57503
43
4.3
43
80
8
203
25
18
6
49
1.72
57296--57503
87
2.5
84
82
6
242
26
17
6
49
1.70
57336--57487
44
3.6
40
83
12
180
25
21
5
47
1.72
57281--57503
42
5.3
42
80
6
229
26
16
7
49
1.71
57454--57550
50
1.9
50
87
0
140
28
16
7
47
1.73
62970--63021
20
2.6
19
79
8
59
65
1
0
32
1.04
64098--64129
6
4.9
7
85
14
50
0
0
12
87
0.54
64098--64129
13
2.5
13
94
0
55
0
0
12
87
0.54
64569--64658
3
29.7
3
84
10
121
65
0
0
34
0.93
64858--65218
124
2.9
122
84
4
442
25
17
15
41
1.89
65131--65454
112
2.9
111
83
6
352
28
20
14
36
1.92
66170--66395
115
2.0
114
90
0
353
30
21
15
32
1.94
67093--67141
12
3.9
12
84
7
53
2
18
0
79
0.83
67089--67143
24
2.3
24
81
9
60
1
18
0
80
0.81
67096--67130
15
2.4
14
95
4
61
0
17
0
82
0.66
77784--77821
17
2.2
17
86
9
51
65
2
2
28
1.19
78421--78472
20
2.6
19
79
8
59
65
1
0
32
1.04
79726--79756
6
5.0
6
92
7
53
0
3
16
80
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80196--80279
3
27.7
3
83
11
109
64
0
0
35
0.94
85922--85955
3
11.3
3
100
0
68
32
0
32
35
1.58

Tables:   1

The End!