Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004913.1 Hibiscus syriacus cultivar Beakdansim tig00011062_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58962

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1523--1562
21
1.9
21
89
0
62
30
7
7
55
1.56
6193--6230
13
2.8
13
82
17
51
60
0
2
36
1.11
6209--6255
19
2.5
19
86
10
62
61
0
6
31
1.21
9200--9266
29
2.3
28
75
14
66
49
2
1
46
1.26
9593--9639
3
15.7
3
95
0
85
34
2
0
63
1.06
9638--9672
14
2.4
15
95
4
63
62
0
0
37
0.95
22438--22465
12
2.3
12
100
0
56
85
0
14
0
0.59
23580--24069
82
5.9
82
95
2
842
28
13
21
36
1.92
24833--24936
41
2.6
40
95
3
190
49
9
23
18
1.77
24875--25400
113
4.7
113
97
0
955
38
13
18
29
1.89
25718--25779
3
20.7
3
96
0
115
33
1
0
64
1.03
25778--25812
14
2.4
15
95
4
63
62
0
0
37
0.95
35244--35401
82
1.9
83
88
3
239
32
5
12
50
1.62
36667--36757
41
2.2
41
88
5
130
37
21
19
20
1.95
36667--36734
21
3.3
21
76
8
77
38
22
19
20
1.94
36746--36809
21
3.1
21
71
8
60
40
25
15
18
1.90
41121--41237
29
4.0
29
97
0
216
36
23
17
22
1.95
44631--44659
2
14.5
2
100
0
58
0
48
0
51
1.00
57807--57903
18
5.6
17
75
21
62
43
1
1
54
1.14
57812--57909
26
3.7
26
75
17
87
43
1
1
54
1.14
57835--57874
17
2.5
16
84
11
55
40
0
2
57
1.12
57871--57907
18
2.0
18
94
5
65
45
0
0
54
1.00

Tables:   1

The End!