Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000492.1 Hibiscus syriacus cultivar Beakdansim tig00000937_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72587

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2687--2717
16
1.9
16
93
0
53
29
9
0
61
1.28
9000--9064
29
2.2
29
88
0
94
50
6
13
29
1.66
10368--10398
16
1.9
16
93
0
53
29
9
0
61
1.28
12363--12420
20
2.8
21
82
10
75
24
15
29
31
1.95
12713--12744
12
2.5
13
90
10
57
40
6
9
43
1.62
14441--14474
12
2.8
12
90
4
50
41
5
14
38
1.70
14955--15011
23
2.6
21
76
10
69
31
15
22
29
1.95
31364--31406
18
2.4
18
80
7
52
0
32
6
60
1.23
35409--35465
25
2.2
25
79
14
71
15
21
5
57
1.57
37163--37206
13
3.3
13
81
12
54
84
0
2
13
0.73
37163--37207
7
6.6
7
80
19
51
84
0
2
13
0.72
38391--38651
39
6.8
39
75
18
212
43
6
3
46
1.46
38472--38569
44
2.2
45
83
9
128
39
6
5
48
1.50
38520--38737
38
6.3
35
71
22
151
42
7
2
46
1.47
38416--38642
118
1.9
122
86
9
333
42
6
3
47
1.47
38405--38651
74
3.2
74
81
12
300
43
6
3
46
1.45
38518--38650
34
3.7
36
78
16
143
43
5
3
47
1.43
38619--38677
26
2.4
25
91
8
95
47
8
0
44
1.33
38580--38714
62
2.2
63
86
9
188
43
8
1
46
1.42
39416--39462
16
2.9
16
100
0
94
31
12
17
38
1.87
48141--48205
29
2.2
29
88
0
94
50
6
13
29
1.66
49517--49547
16
1.9
16
93
0
53
29
9
0
61
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51535--51592
20
2.8
21
82
10
75
24
15
29
31
1.95
51886--51917
12
2.5
13
90
10
57
40
6
9
43
1.62
53615--53648
12
2.8
12
90
4
50
41
5
14
38
1.70
54136--54192
23
2.6
21
73
10
60
31
17
22
28
1.97
70479--70521
18
2.4
18
80
7
52
0
32
6
60
1.23

Tables:   1

The End!