Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004927.1 Hibiscus syriacus cultivar Beakdansim tig00011091_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36518

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2161--2189
2
14.5
2
100
0
58
48
0
0
51
1.00
3452--3531
23
3.5
23
91
0
133
16
23
27
32
1.96
5241--5299
23
2.6
24
79
12
63
20
22
25
32
1.98
10423--10484
23
2.7
22
78
7
70
17
22
25
33
1.96
15936--16072
68
2.0
68
92
0
229
30
26
13
29
1.94
16282--16949
55
12.3
55
86
3
852
27
18
18
35
1.95
16282--16951
163
4.1
163
86
3
882
27
18
18
35
1.95
17361--17432
20
3.5
20
72
10
74
20
30
16
31
1.95
17339--17453
41
2.8
41
90
3
171
23
26
16
33
1.95
17380--17456
21
3.7
21
74
10
86
24
24
18
32
1.97
19717--19852
65
2.1
66
97
2
256
32
18
19
29
1.96
21061--21129
24
2.9
24
91
4
104
36
8
17
37
1.81
21324--21362
2
19.5
2
100
0
78
48
0
0
51
1.00
23282--23344
26
2.4
26
100
0
126
47
12
15
23
1.80

Tables:   1

The End!