Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004930.1 Hibiscus syriacus cultivar Beakdansim tig00011094_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97229

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5673--5768
17
5.5
17
75
13
81
39
13
7
39
1.72
12601--12641
22
1.9
22
90
5
66
12
7
19
60
1.54
14473--14541
29
2.4
29
95
2
122
59
0
26
14
1.36
24924--24956
18
1.9
17
88
11
50
75
3
12
9
1.14
28329--28373
23
2.0
23
83
16
58
51
11
6
31
1.63
29080--29115
17
2.1
17
89
0
54
38
0
30
30
1.58
29144--29195
16
3.1
16
80
8
50
69
0
19
11
1.18
29310--29362
25
2.2
24
83
10
63
9
16
5
67
1.37
29392--29436
6
7.3
6
85
14
65
2
17
0
80
0.82
37049--37083
2
17.5
2
100
0
70
51
0
0
48
1.00
39916--39951
17
2.1
18
89
5
56
36
0
30
33
1.58
40600--40715
35
3.3
35
86
1
160
33
3
35
27
1.74
41057--41106
19
2.6
19
83
0
64
46
6
12
36
1.66
45669--45706
17
2.2
17
100
0
76
44
10
10
34
1.73
60107--60148
15
2.7
15
88
7
57
54
0
28
16
1.42
67223--67267
16
3.0
15
81
9
56
64
0
17
17
1.29
67223--67267
15
3.0
14
78
15
54
64
0
17
17
1.29
68168--68218
19
2.6
20
90
3
77
43
5
15
35
1.71
72356--72406
19
2.6
20
90
3
77
43
5
15
35
1.71
79221--79280
2
30.5
2
93
3
104
50
0
1
48
1.11
85210--85256
25
1.9
25
86
4
69
2
14
6
76
1.08
89608--89655
15
3.1
14
80
16
51
58
0
22
18
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89605--89657
26
2.1
24
83
16
63
58
0
20
20
1.39

Tables:   1

The End!