Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004931.1 Hibiscus syriacus cultivar Beakdansim tig00011095_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72085

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
923--988
22
3.0
22
90
0
78
19
12
34
33
1.89
2062--2269
43
4.9
42
78
5
213
19
19
15
45
1.86
2053--2269
83
2.5
84
77
5
213
19
19
16
44
1.87
4809--4858
22
2.3
22
82
0
64
52
6
2
40
1.38
4843--4926
44
1.9
44
87
0
123
50
7
5
36
1.54
4800--5213
197
2.1
197
83
4
532
48
9
4
37
1.57
5329--5369
20
2.1
20
86
4
57
34
2
9
53
1.47
5773--5830
22
2.6
23
91
5
100
31
25
18
24
1.98
6111--6137
14
1.9
14
100
0
54
44
3
7
44
1.49
6126--6194
19
3.5
19
72
12
68
52
2
5
39
1.41
6216--6254
16
2.5
16
91
4
62
41
5
10
43
1.61
7343--7405
11
5.4
11
83
14
72
47
4
1
46
1.33
7338--7467
24
5.4
24
76
11
113
43
6
3
46
1.46
7334--7487
24
6.7
23
75
13
97
44
5
2
46
1.41
7338--7455
48
2.5
48
84
8
143
42
5
3
48
1.44
7484--7525
16
2.8
15
89
10
52
45
11
0
42
1.41
7494--7525
16
2.0
16
100
0
64
43
12
0
43
1.42
7519--7547
15
1.9
15
100
0
58
55
10
0
34
1.34
7456--7560
26
4.2
24
68
17
52
52
9
0
38
1.34
9109--9152
23
2.0
23
81
4
54
50
11
2
36
1.51
29183--29222
21
2.0
20
85
9
55
75
2
7
15
1.14
30397--30457
29
2.1
29
100
0
122
16
13
9
60
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36255--36528
133
2.1
133
88
4
410
37
21
14
26
1.92
46806--46844
16
2.4
16
87
12
53
76
0
0
23
0.78
47011--47215
53
3.9
53
87
0
302
20
25
21
32
1.97
47594--47717
42
3.0
41
91
1
185
33
23
16
25
1.96
47765--47851
43
2.0
43
86
0
120
34
19
17
28
1.94
47829--48026
93
2.1
93
89
0
306
32
22
15
29
1.94
48140--48238
42
2.4
42
79
5
112
30
23
21
25
1.99
54525--54567
21
2.0
22
81
4
52
9
16
27
46
1.77
54988--55077
47
1.9
46
84
8
119
36
22
11
30
1.89
58376--58415
10
3.9
10
81
18
55
77
0
0
22
0.77

Tables:   1

The End!