Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004933.1 Hibiscus syriacus cultivar Beakdansim tig00011099_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67110

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
175--240
25
2.6
26
92
4
116
25
37
0
36
1.57
5575--5648
36
2.1
37
84
7
107
51
14
13
20
1.76
14672--14707
13
2.9
13
92
8
58
80
0
13
5
0.88
14670--14717
13
3.8
12
83
8
51
81
0
14
4
0.84
21813--21847
11
3.1
11
91
4
52
28
11
0
60
1.32
23138--23192
24
2.3
24
87
0
74
10
14
16
58
1.64
33048--33097
19
2.5
20
87
3
75
44
6
14
36
1.69
37357--37388
16
2.0
16
100
0
64
56
6
31
6
1.49
53107--53135
12
2.5
12
94
5
51
31
0
41
27
1.56
53509--53550
20
2.2
20
95
4
77
45
7
11
35
1.69
53907--53998
39
2.4
39
90
0
148
15
33
15
35
1.89
61347--61378
13
2.5
13
100
0
64
87
12
0
0
0.54
66049--66097
11
4.4
11
75
14
55
83
10
6
0
0.80

Tables:   1

The End!