Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004945.1 Hibiscus syriacus cultivar Beakdansim tig00011117_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60268

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9177--9280
42
2.5
42
79
3
102
44
23
13
19
1.86
9352--9430
41
1.9
41
86
0
113
31
20
22
25
1.98
16438--16472
13
2.7
13
91
8
54
77
5
17
0
0.96
23658--23784
59
2.2
59
95
0
227
27
24
16
31
1.96
35862--36026
42
4.0
41
81
8
151
34
20
16
28
1.94
35872--36048
41
4.3
40
80
9
171
34
19
16
29
1.94
35872--36048
83
2.2
81
81
8
198
34
19
16
29
1.94
46159--46255
21
4.6
21
82
0
95
41
19
38
1
1.59
46684--46787
43
2.4
43
79
3
111
35
27
10
25
1.89
46803--47064
43
6.1
43
76
5
208
30
22
19
27
1.98
46772--47022
128
2.0
128
81
3
299
32
23
17
26
1.97
52432--52472
16
2.4
18
88
12
68
58
0
4
36
1.20
55612--55653
15
2.7
16
82
14
52
28
0
0
71
0.86
57770--57815
24
1.9
25
82
8
60
43
2
6
47
1.41
58133--58261
40
3.2
40
84
3
168
28
18
18
34
1.95
58238--58285
24
2.0
23
92
4
78
27
10
25
37
1.88
58166--58365
104
1.9
104
83
4
260
27
16
18
37
1.92
58261--58634
41
9.2
41
73
9
291
30
18
16
35
1.93
58268--58632
82
4.5
82
82
3
400
30
18
16
35
1.93
58261--58632
163
2.3
162
83
3
444
30
18
16
34
1.93

Tables:   1

The End!