Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004956.1 Hibiscus syriacus cultivar Beakdansim tig00011143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61897

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3870--3904
14
2.6
13
91
8
61
34
22
25
17
1.96
5823--5861
20
2.0
20
89
0
60
30
33
15
20
1.94
14603--14693
46
2.0
46
86
2
130
28
24
17
29
1.97
19683--19729
24
2.0
24
100
0
94
38
12
19
29
1.89
20271--20335
27
2.4
27
97
0
121
10
23
13
52
1.72
24809--24954
76
2.0
72
91
5
238
35
13
15
34
1.87
33324--33368
3
15.7
3
86
9
67
33
0
2
64
1.06
33313--33368
28
2.0
28
93
6
96
30
1
3
64
1.21
38388--38421
15
2.3
15
94
0
59
26
20
8
44
1.81
46130--46214
20
4.2
19
81
15
84
31
7
4
56
1.47
47340--47631
113
2.6
113
87
2
401
39
15
17
27
1.90
47703--47766
20
3.2
20
63
20
53
42
9
23
25
1.84
49762--49965
98
2.1
96
78
15
204
37
10
8
43
1.70
58711--58806
29
3.2
29
66
21
72
35
16
3
44
1.64
58701--58840
60
2.3
60
82
2
174
31
18
7
42
1.77
58988--59135
60
2.5
59
81
6
158
45
2
17
34
1.60
59699--59738
20
2.1
20
90
9
66
52
10
20
17
1.72
61745--61798
23
2.3
24
87
6
76
44
9
11
35
1.72
61753--61805
23
2.4
21
81
9
70
43
9
7
39
1.65

Tables:   1

The End!