Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004960.1 Hibiscus syriacus cultivar Beakdansim tig00011148_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50625

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--464
18
2.2
18
90
0
62
32
0
0
67
0.91
2484--2570
19
4.6
19
84
8
124
28
19
27
24
1.98
2501--2587
37
2.4
37
96
1
158
28
17
27
26
1.97
2501--2586
19
4.7
17
80
12
91
29
17
27
25
1.97
2537--2717
64
2.8
60
78
13
168
27
15
26
30
1.96
2664--2714
19
2.7
19
85
8
70
25
15
35
23
1.94
5297--5376
24
3.5
23
77
14
94
27
23
26
22
2.00
5274--5381
45
2.5
41
75
11
117
25
21
26
26
1.99
11228--11391
64
2.5
65
83
4
197
26
14
25
33
1.94
11289--11327
19
2.1
19
95
0
69
25
15
38
20
1.92
11353--11392
21
1.9
21
94
0
71
22
15
30
32
1.94
15558--15599
22
1.9
22
90
0
66
23
14
16
45
1.84
23869--23972
39
2.7
39
83
4
124
46
9
6
37
1.63
28512--28625
30
3.8
30
98
0
219
36
21
12
28
1.90
29474--29526
20
2.7
20
93
0
88
26
22
18
32
1.97
40613--40644
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!