Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004963.1 Hibiscus syriacus cultivar Beakdansim tig00011155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58386

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1332--1363
2
16.0
2
100
0
64
50
0
0
50
1.00
1790--1843
2
27.5
2
96
3
101
50
0
0
50
1.00
3891--3932
21
2.0
22
85
4
59
40
0
16
42
1.48
8323--8367
23
2.0
23
90
0
72
33
22
26
17
1.96
14997--15080
23
3.7
23
93
0
132
28
28
27
15
1.96
16892--17032
32
4.4
32
82
3
142
17
26
29
27
1.97
20337--20392
15
3.6
15
79
9
67
42
12
12
32
1.80
20340--20390
17
3.1
17
77
11
61
43
11
9
35
1.75
20434--20536
33
3.2
33
91
2
165
44
15
7
32
1.75
20531--20572
21
2.0
21
95
0
75
47
7
14
30
1.71
22871--22903
15
2.3
15
89
5
50
15
9
12
63
1.51
23878--23989
34
3.3
32
73
14
82
17
15
20
46
1.84
37750--37802
23
2.4
22
82
14
65
45
0
5
49
1.26
45086--45133
19
2.5
19
75
0
51
0
25
6
68
1.12
52571--52635
32
2.0
32
100
0
130
33
24
6
35
1.80
58297--58345
21
2.3
20
80
10
53
42
4
4
48
1.40

Tables:   1

The End!