Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004964.1 Hibiscus syriacus cultivar Beakdansim tig00011156_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42807

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2144--2178
13
2.7
13
95
0
61
60
5
17
17
1.55
4382--4439
27
2.1
27
84
6
73
24
10
18
46
1.80
7044--7082
20
2.0
20
89
0
60
25
35
30
7
1.84
7232--7294
24
2.6
24
87
0
81
46
20
12
20
1.83
8780--8837
20
2.7
22
84
15
77
39
22
24
13
1.90
10230--10313
30
2.7
31
90
5
127
46
2
9
41
1.49
10508--10582
21
3.7
21
74
13
84
53
6
0
40
1.27
10508--10594
40
2.2
40
89
6
133
51
8
1
39
1.39
15799--15832
2
17.0
2
100
0
68
50
0
0
50
1.00
15846--15875
15
2.1
14
93
6
51
76
6
0
16
0.99
15867--15907
18
2.3
19
83
12
59
63
0
0
36
0.95
15871--15907
17
2.1
18
90
5
58
62
0
0
37
0.96
16298--16338
19
2.2
18
91
4
64
53
2
7
36
1.42
22442--22486
21
2.1
21
91
0
72
35
40
13
11
1.80
28149--28194
23
2.0
23
86
0
65
19
17
23
39
1.92
28184--28235
24
2.2
24
89
0
77
21
21
21
36
1.95
29280--29319
2
20.0
2
100
0
80
50
0
0
50
1.00
38943--38982
21
2.0
21
85
5
55
35
7
25
32
1.84

Tables:   1

The End!