Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004969.1 Hibiscus syriacus cultivar Beakdansim tig00011162_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61018

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19469--19540
24
3.0
24
85
0
108
50
18
13
18
1.79
19471--19540
12
5.8
12
73
6
61
50
18
14
17
1.79
19469--19577
48
2.3
47
85
6
139
47
16
15
20
1.82
20705--20740
18
2.0
18
88
0
54
30
16
0
52
1.44
22049--22080
15
2.1
15
94
0
55
25
31
31
12
1.92
22088--22143
5
10.0
5
78
21
58
8
19
53
17
1.70
22093--22143
18
2.8
18
96
0
93
9
19
52
17
1.72
22075--22126
23
2.3
23
93
0
86
11
21
50
17
1.77
22069--22121
13
4.3
13
79
13
67
15
20
47
16
1.83
27500--27562
33
1.9
33
87
6
92
36
14
9
39
1.78
30982--31036
23
2.4
23
100
0
110
45
3
9
41
1.53
30995--31036
13
3.5
13
75
18
54
42
4
9
42
1.58
32692--32743
18
2.9
18
85
8
79
26
19
36
17
1.94
33553--34079
267
2.0
256
93
4
885
32
12
18
35
1.89
40210--40238
2
14.5
2
100
0
58
51
0
0
48
1.00
45943--46002
6
10.3
6
82
10
72
55
0
43
1
1.10
47064--47149
41
2.1
41
91
2
138
33
15
19
31
1.93
51623--51649
14
1.9
14
100
0
54
29
22
18
29
1.97
51700--51770
20
3.5
20
77
11
72
33
16
21
28
1.95
51715--51774
20
2.9
20
82
5
75
36
15
23
25
1.93
57534--57574
20
2.0
21
86
13
59
34
14
19
31
1.92

Tables:   1

The End!