Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004977.1 Hibiscus syriacus cultivar Beakdansim tig00011173_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57858

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187--266
2
40.5
2
94
2
144
48
0
1
50
1.08
1005--1060
21
2.7
21
82
0
76
33
21
17
26
1.96
7555--7632
31
2.5
31
91
0
129
21
14
11
52
1.72
8842--8916
31
2.5
31
86
2
107
56
14
9
20
1.66
9039--9068
15
2.0
15
100
0
60
60
13
0
26
1.34
26025--26076
22
2.4
22
96
0
95
15
19
28
36
1.92
26985--27015
15
2.1
15
93
0
53
41
12
16
29
1.85
33346--33397
25
2.1
25
96
0
95
13
23
13
50
1.77
40339--40390
25
2.1
25
96
0
95
13
23
13
50
1.77
43433--43459
13
2.1
13
100
0
54
7
48
0
44
1.31
48093--48551
229
2.0
229
92
0
765
38
12
20
28
1.89
48985--49029
20
2.2
20
84
7
56
31
11
17
40
1.85
49482--50330
421
2.0
421
90
0
1324
26
13
19
40
1.89

Tables:   1

The End!