Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004983.1 Hibiscus syriacus cultivar Beakdansim tig00011182_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58835

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2621--2743
42
2.9
42
88
0
183
29
17
23
29
1.97
3918--3966
21
2.3
21
96
0
89
36
0
30
32
1.58
4870--4908
20
2.0
20
89
0
60
25
12
7
53
1.65
5562--5616
24
2.3
24
93
0
92
21
10
25
41
1.86
12030--12080
17
2.8
18
88
8
68
27
19
7
45
1.78
12037--12107
19
3.8
19
80
10
76
30
16
2
49
1.61
12188--12217
15
2.1
14
93
6
51
40
13
3
43
1.60
12748--12826
35
2.3
35
97
0
149
31
15
8
44
1.77
14473--14551
29
2.8
28
75
11
72
35
16
2
45
1.61
18658--18719
19
3.3
19
74
17
65
40
16
6
37
1.74
18651--18730
38
2.1
39
88
2
117
38
12
7
41
1.71
18671--18738
19
3.6
19
77
0
73
39
13
4
42
1.64
21205--21233
14
2.0
15
93
6
51
51
0
0
48
1.00
22264--22613
59
5.9
59
91
0
558
33
22
10
34
1.87
24251--24628
187
2.0
187
98
0
738
30
25
14
30
1.94
32793--33055
59
4.5
59
89
4
428
30
23
11
34
1.89
33436--33491
19
2.7
21
81
13
64
25
32
17
25
1.97
35718--36722
55
18.3
55
83
4
1064
29
19
18
33
1.95
35718--36724
110
9.2
110
83
4
1172
28
19
17
33
1.95
35718--36727
165
6.1
165
83
2
1190
29
19
18
33
1.95
37068--37121
19
2.6
21
88
8
76
27
16
18
37
1.93
53075--53110
18
1.9
19
88
5
56
8
16
5
69
1.33

Tables:   1

The End!