Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004987.1 Hibiscus syriacus cultivar Beakdansim tig00011188_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61443

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5518--6508
183
5.5
182
87
4
1409
41
13
15
28
1.86
5518--6508
357
2.8
360
88
4
1467
41
13
15
28
1.86
5513--6508
540
1.9
532
88
4
1529
41
13
15
28
1.86
8434--8688
116
2.2
115
84
6
329
30
16
14
39
1.88
18646--18676
3
10.3
3
100
0
62
67
0
32
0
0.91
20753--20801
22
2.3
22
79
6
57
28
14
16
40
1.87
23703--23812
20
5.6
20
89
1
150
35
10
20
33
1.87
24216--24281
33
2.0
33
84
0
87
25
15
28
30
1.96
27164--27221
20
3.0
20
84
2
64
34
13
18
32
1.91
27643--27707
33
2.0
32
84
3
85
24
15
29
30
1.96
29578--29602
6
4.2
6
100
0
50
84
0
0
16
0.63
32082--32114
16
1.9
17
88
11
50
36
0
3
60
1.12
40120--40220
24
4.3
23
75
5
94
20
24
20
33
1.97
40120--40220
47
2.1
47
85
7
134
20
24
20
33
1.97
51704--51763
23
2.9
20
87
9
77
21
33
26
18
1.96
56599--56710
23
4.8
24
78
10
99
16
22
23
37
1.94
57576--57626
23
2.2
23
92
0
84
60
7
3
27
1.42
60231--60269
19
2.1
19
85
9
53
28
10
25
35
1.89

Tables:   1

The End!