Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004988.1 Hibiscus syriacus cultivar Beakdansim tig00011189_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61449

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12430--12464
2
17.5
2
100
0
70
51
0
0
48
1.00
20447--20551
49
2.3
46
84
12
128
33
0
11
54
1.43
20781--20900
58
2.1
59
85
4
163
28
16
20
34
1.95
23038--23079
17
2.5
17
82
14
52
76
9
11
2
1.12
24832--24877
22
2.2
22
84
7
60
28
6
15
50
1.69
25574--25604
16
1.9
16
93
0
53
77
9
0
12
0.99
29378--29491
59
1.9
59
92
0
192
25
16
22
35
1.95
33366--33423
24
2.4
24
88
0
71
22
22
15
39
1.91
33377--33453
24
3.2
25
85
7
97
19
22
19
38
1.93
33411--33596
24
7.7
24
78
9
157
20
23
14
41
1.89
33389--33596
72
2.9
71
75
7
195
21
23
14
40
1.90
33554--33659
24
4.4
24
78
5
99
20
18
18
41
1.91
48364--48422
23
2.6
23
77
0
64
42
10
22
25
1.84
50237--50271
18
1.9
18
94
0
61
28
0
0
71
0.86
51268--51399
68
1.9
68
82
0
165
37
19
18
24
1.93
51345--51429
31
2.7
32
83
5
102
35
17
22
24
1.95
51922--51969
19
2.5
19
100
0
96
33
29
8
29
1.86

Tables:   1

The End!