Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004989.1 Hibiscus syriacus cultivar Beakdansim tig00011196_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41192

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1175--1290
36
3.3
35
77
9
121
35
19
12
31
1.90
3510--3577
30
2.3
29
97
2
127
30
14
27
26
1.95
12263--12862
55
10.9
55
84
2
704
33
19
17
29
1.95
12263--12862
165
3.6
165
86
1
790
33
19
17
29
1.95
13370--13426
20
2.8
21
84
10
73
24
24
19
31
1.98
19580--20082
55
9.3
55
84
5
645
32
19
18
29
1.95
32215--32263
24
2.1
22
81
7
53
63
16
14
6
1.49
39907--39935
11
2.5
12
94
5
51
41
0
31
27
1.56

Tables:   1

The End!