Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004999.1 Hibiscus syriacus cultivar Beakdansim tig00011220_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74331

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2065--2133
33
2.1
33
83
5
86
31
1
36
30
1.67
2119--2215
13
8.0
12
72
22
62
28
3
37
30
1.73
2104--2216
36
3.2
36
92
1
174
27
3
36
32
1.74
4151--4228
35
2.2
37
90
4
124
30
37
3
28
1.75
18091--18143
23
2.2
25
87
9
76
9
16
13
60
1.58
18175--18201
11
2.5
11
100
0
54
18
37
7
37
1.79
19452--19492
11
3.7
11
90
0
64
75
0
9
14
1.04
20320--20388
33
2.1
33
83
5
86
31
1
36
30
1.67
24281--24349
33
2.1
33
83
5
86
31
1
36
30
1.67
29730--29769
11
3.6
11
86
0
62
2
0
10
87
0.63
30108--30143
11
3.3
11
84
0
54
72
5
8
13
1.27
36832--36875
23
1.9
23
90
0
70
59
15
11
13
1.62
45069--45105
15
2.4
16
90
4
58
72
2
8
16
1.19
45069--45110
15
2.7
15
88
7
57
71
2
9
16
1.23
49393--49442
8
6.0
8
80
17
57
0
8
8
84
0.79
49382--49440
16
3.4
17
86
11
75
0
10
8
81
0.88
49382--49442
17
3.4
18
86
11
90
0
9
9
80
0.91
49796--49832
15
2.4
16
90
4
58
72
2
8
16
1.19
49796--49837
15
2.7
15
88
7
57
71
2
9
16
1.23
60008--60076
33
2.1
33
86
5
95
31
0
36
31
1.58
60060--60159
36
2.8
36
87
1
148
29
4
36
31
1.76
65344--65386
17
2.7
16
85
7
61
0
16
0
83
0.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65346--65387
10
4.0
10
90
9
66
0
14
0
85
0.59
65359--65396
20
1.9
20
88
0
58
0
10
5
84
0.77
65788--65852
13
5.4
12
75
21
57
29
3
35
32
1.73
65787--65885
36
2.8
36
92
1
155
29
4
35
31
1.76
70866--70891
13
2.0
13
100
0
52
30
30
0
38
1.58

Tables:   1

The End!