Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000050.1 Hibiscus syriacus cultivar Beakdansim tig00000077_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80795

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7402--7449
24
2.0
24
95
0
87
50
18
8
22
1.74
7542--7571
4
7.2
4
96
3
51
73
0
0
26
0.84
15644--15694
23
2.2
23
80
16
61
54
3
0
41
1.19
28506--28558
21
2.5
22
84
6
72
71
3
5
18
1.21
28534--28613
33
2.4
34
82
4
99
70
0
5
25
1.08
28528--28615
34
2.5
34
81
9
97
70
0
4
25
1.06
28527--28617
36
2.6
33
81
10
92
69
0
4
26
1.07
28994--29043
18
2.9
17
85
5
57
0
40
2
58
1.10
29096--29198
17
6.3
16
73
15
77
55
27
0
17
1.42
29043--29192
50
3.0
50
87
3
212
52
27
1
18
1.53
29852--29936
32
2.7
31
80
7
100
14
3
24
57
1.53
29893--29989
50
1.9
50
85
4
133
17
4
27
50
1.64
33989--34035
24
2.0
23
95
4
85
42
6
8
42
1.60
44967--44994
2
14.0
2
100
0
56
50
0
0
50
1.00
51147--51171
4
6.2
4
100
0
50
52
24
0
24
1.48
51538--51590
27
2.0
27
88
0
79
50
13
35
0
1.41
70080--70104
12
2.1
12
100
0
50
56
0
0
44
0.99
70041--70154
42
2.6
46
77
18
120
41
2
3
52
1.32
77350--77385
18
2.0
18
100
0
72
27
22
33
16
1.95
77358--77517
58
2.8
58
95
0
284
25
21
21
32
1.98
78587--78626
18
2.2
18
95
0
71
7
17
25
50
1.72

Tables:   1

The End!