Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000500.1 Hibiscus syriacus cultivar Beakdansim tig00000952_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83126

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
726--777
21
2.5
21
90
6
79
26
28
23
21
1.99
737--781
21
2.1
21
100
0
90
22
37
17
22
1.94
2796--2881
23
3.9
22
84
9
113
38
24
10
26
1.88
2823--2897
21
3.5
21
83
7
96
45
22
10
21
1.82
2800--2897
44
2.2
44
87
3
135
41
22
11
24
1.86
5868--5925
28
2.1
27
96
3
107
27
17
12
43
1.84
9269--9330
32
1.9
32
93
0
106
45
19
0
35
1.51
9894--10021
21
5.9
22
74
17
115
45
24
8
21
1.80
9894--10026
44
3.0
44
85
4
187
44
24
8
22
1.80
11035--11065
11
2.8
11
95
0
53
25
22
0
51
1.48
21440--21496
28
2.0
28
100
0
114
35
7
22
35
1.82
21688--22246
54
10.4
54
85
3
714
33
12
16
37
1.86
40722--41180
54
8.5
54
87
4
631
33
13
16
37
1.87
44691--44744
20
2.7
20
97
0
99
44
12
9
33
1.75
47587--47621
2
18.0
2
88
5
54
51
0
2
45
1.16
49473--49520
21
2.2
22
88
3
71
79
10
8
2
1.02
49465--49527
31
2.0
31
84
6
83
77
12
7
1
1.05
64735--64802
35
2.0
34
88
2
100
47
0
2
50
1.16
65026--65054
2
14.5
2
100
0
58
48
0
0
51
1.00
78746--78824
29
2.8
28
74
11
70
36
12
3
46
1.60

Tables:   1

The End!