Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005002.1 Hibiscus syriacus cultivar Beakdansim tig00011223_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71987

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7774--7807
6
5.7
6
92
0
50
35
35
8
20
1.84
19439--19486
3
16.0
3
86
0
69
27
35
0
37
1.57
19491--19528
3
12.7
3
100
0
76
31
0
0
68
0.90
19868--19909
23
1.9
21
85
9
57
35
0
40
23
1.55
25735--25768
17
2.0
17
94
0
59
32
0
5
61
1.20
38119--38150
16
2.0
16
93
0
55
43
0
3
53
1.16
47995--48021
14
1.9
14
100
0
54
74
11
14
0
1.08
51543--51579
16
2.2
17
86
13
51
32
0
18
48
1.49
58946--58997
21
2.5
22
78
9
63
51
0
0
48
1.00
58956--59014
23
2.7
21
76
10
57
52
1
1
44
1.21
61204--61289
23
3.7
23
72
20
88
18
26
26
27
1.98
62800--62838
19
2.1
19
95
0
69
20
38
15
25
1.92
62737--62945
65
3.2
64
82
8
203
30
26
16
26
1.97
62786--62948
65
2.5
65
84
3
213
30
26
15
26
1.96
70275--70313
19
2.1
19
95
0
69
20
38
15
25
1.92
70296--70401
45
2.3
46
88
1
160
30
22
16
31
1.95

Tables:   1

The End!