Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005003.1 Hibiscus syriacus cultivar Beakdansim tig00011224_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74883

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367--436
20
3.5
20
90
0
113
42
20
17
20
1.89
326--485
20
8.0
20
73
12
75
40
23
15
21
1.91
2674--2724
20
2.5
20
80
0
66
35
19
19
25
1.95
6515--6587
3
24.7
3
94
2
130
32
1
0
65
1.01
13436--13466
15
2.1
15
100
0
62
32
12
16
38
1.86
21590--21663
20
3.5
21
69
12
62
27
18
18
35
1.95
23371--23408
18
2.1
18
85
9
51
55
0
0
44
0.99
24661--24802
36
3.9
36
88
4
214
19
17
17
45
1.85
24661--24802
73
1.9
73
88
5
216
19
17
17
45
1.85
35395--35475
23
3.5
23
93
0
126
22
29
18
29
1.97
48777--48874
42
2.3
43
87
1
135
25
17
21
35
1.95
48903--49099
43
4.5
43
85
1
232
25
21
20
31
1.98
49561--49600
3
13.3
3
100
0
80
67
0
0
32
0.91
50508--50535
2
14.0
2
100
0
56
50
0
0
50
1.00
50591--50639
19
2.5
19
80
16
55
22
6
0
71
1.08
52027--52090
27
2.4
27
86
0
83
57
1
1
39
1.17
54584--54617
18
1.9
17
88
5
50
29
0
2
67
1.05
54589--54618
12
2.6
12
94
5
53
33
0
0
66
0.92
62180--62212
9
3.9
9
84
15
52
12
15
0
72
1.12
62183--62213
16
1.9
16
100
0
62
12
12
0
74
1.08
64437--64497
21
2.9
21
95
0
113
34
21
14
29
1.93

Tables:   1

The End!