Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005007.1 Hibiscus syriacus cultivar Beakdansim tig00011237_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60846

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4709--4745
2
18.5
2
94
0
65
48
0
0
51
1.00
6303--6458
39
4.0
39
85
0
186
20
28
18
32
1.96
11343--11394
18
2.9
18
94
2
88
23
28
23
25
1.99
11638--12045
197
2.0
198
91
5
653
28
17
16
36
1.93
12427--12546
39
3.2
36
81
10
123
20
25
22
31
1.98
12445--12546
39
2.6
39
87
3
134
21
25
22
30
1.99
17097--17221
43
2.8
44
78
6
128
41
13
14
30
1.84
18495--18602
13
9.1
12
72
18
84
1
21
0
76
0.87
18503--18591
5
16.8
5
75
21
76
2
20
0
77
0.87
18487--18549
29
2.2
29
91
5
101
3
17
0
79
0.86
18495--18605
16
7.0
15
76
12
82
1
21
0
76
0.88
30107--30240
69
1.9
69
93
3
234
36
20
12
30
1.90
35489--35538
24
2.1
24
88
7
75
26
2
14
58
1.47
40883--40932
24
2.1
24
88
7
75
26
2
14
58
1.47
53220--53264
18
2.4
18
81
3
54
62
0
13
24
1.31
53204--53256
22
2.3
22
83
6
61
60
0
9
30
1.28
55398--55442
19
2.3
19
96
3
81
20
20
28
31
1.97
59184--59472
80
3.6
79
87
1
398
32
24
19
23
1.98

Tables:   1

The End!