Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005012.1 Hibiscus syriacus cultivar Beakdansim tig00011252_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57733

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17--56
1
40.0
1
84
0
53
92
0
7
0
0.38
14--56
17
2.4
18
88
7
70
90
0
9
0
0.45
1027--1317
94
3.1
94
89
5
464
29
15
20
34
1.94
1205--1420
115
1.9
115
91
2
346
35
14
20
29
1.92
2115--2989
222
3.9
220
87
5
1109
37
15
19
27
1.91
2115--2988
112
7.8
112
91
4
1117
37
15
18
27
1.91
2816--2860
24
1.9
23
82
13
56
48
6
26
17
1.72
3197--3256
3
20.0
3
86
6
86
38
0
0
61
0.96
7028--7096
23
3.0
23
89
0
93
26
26
27
20
1.99
9352--9395
21
2.1
21
83
4
54
61
0
2
36
1.09
22608--22684
31
2.5
31
85
2
102
37
10
27
24
1.88
24468--24538
31
2.3
31
85
4
90
28
18
12
40
1.87
27915--28012
50
2.0
50
91
0
160
39
22
6
31
1.78
28082--28278
99
2.0
98
95
1
358
45
12
11
30
1.77
28088--28288
51
4.1
51
81
5
252
45
12
11
30
1.78
33616--33666
20
2.5
20
80
0
57
41
7
0
50
1.31
34330--34370
12
3.6
12
77
12
50
48
19
14
17
1.81
35060--35215
31
5.0
31
88
4
201
39
21
17
21
1.93
35060--35215
62
2.5
62
90
2
233
39
21
17
21
1.93
38672--38717
18
2.7
18
86
6
60
26
0
23
50
1.50
42281--42342
21
3.0
21
92
0
106
22
22
22
32
1.98
48977--49030
23
2.4
23
78
9
58
35
11
14
38
1.82

Tables:   1

The End!