Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005013.1 Hibiscus syriacus cultivar Beakdansim tig00011254_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73194

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4651--4684
2
17.5
2
93
6
61
52
0
0
47
1.00
5664--5697
11
3.0
11
91
4
50
76
0
0
23
0.79
6334--6380
13
3.5
13
77
16
51
27
14
8
48
1.73
6430--6496
26
2.5
26
92
2
116
49
2
16
31
1.61
8819--8856
20
1.9
20
100
0
76
26
5
21
47
1.71
12973--13403
59
7.4
57
73
10
284
29
23
11
35
1.90
13027--13403
117
3.2
117
86
3
492
29
24
11
35
1.90
20061--20096
14
2.6
14
95
0
63
22
13
19
44
1.86
20315--20395
31
2.6
30
81
15
85
46
2
0
50
1.14
20892--20934
21
2.0
21
86
0
59
27
25
6
39
1.81
20975--21253
59
4.7
57
74
9
238
26
23
12
37
1.90
20981--21341
118
3.1
118
88
3
489
28
22
12
37
1.90
20997--21346
59
6.0
57
73
10
235
28
22
12
36
1.90
21703--21741
20
2.0
20
94
0
69
28
20
17
33
1.96
23063--23104
21
2.0
21
100
0
84
28
19
9
42
1.82
23951--24009
17
3.5
17
79
2
66
40
15
5
38
1.69
25768--25806
20
1.9
21
89
5
62
23
10
10
56
1.63
35013--35101
36
2.5
36
100
0
178
30
11
16
41
1.84
36502--36536
18
1.9
18
88
11
54
20
0
11
68
1.20
38064--38102
20
1.9
21
89
5
62
23
10
10
56
1.63
40353--40426
37
2.0
37
97
0
139
41
4
29
24
1.73
46888--46976
36
2.5
36
96
0
160
31
8
16
42
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50838--50890
17
3.1
17
80
0
61
37
18
9
33
1.83
51788--51943
78
2.0
78
97
0
294
25
25
7
42
1.80
64716--64774
22
2.7
22
81
5
66
37
23
18
20
1.94
70990--71043
2
27.5
2
96
3
101
51
0
0
48
1.00

Tables:   1

The End!