Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005014.1 Hibiscus syriacus cultivar Beakdansim tig00011256_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49502

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1886--1928
15
2.8
16
80
16
54
32
6
4
55
1.47
4590--4632
13
3.4
13
80
6
52
25
0
37
37
1.56
4974--5025
19
2.6
21
87
6
72
46
7
15
30
1.74
8234--8287
23
2.3
22
81
15
63
1
22
1
74
1.02
8988--9038
19
2.5
21
90
6
79
47
7
13
31
1.72
15679--15726
19
2.5
19
72
0
51
8
16
14
60
1.57
20053--20100
19
2.7
17
78
15
53
66
12
12
8
1.44
24603--24654
19
2.6
21
87
6
72
44
7
13
34
1.72
28642--28683
22
2.0
21
90
4
66
38
35
2
23
1.68
29991--30043
26
2.0
27
82
17
67
52
9
30
7
1.61
35244--35273
13
2.4
13
94
5
53
43
0
30
26
1.55
40331--40430
36
2.8
36
92
1
157
31
36
4
29
1.76
40364--40429
13
5.5
11
74
22
62
33
34
3
28
1.73
40414--40481
32
2.1
33
83
8
86
30
36
0
32
1.58
40833--40874
5
8.2
5
80
15
50
83
0
16
0
0.65
40833--40874
17
2.7
16
82
10
52
83
0
16
0
0.65
46009--46106
36
2.8
35
84
4
128
30
36
4
28
1.76
46090--46156
32
2.1
32
83
10
84
32
37
0
29
1.58

Tables:   1

The End!