Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005022.1 Hibiscus syriacus cultivar Beakdansim tig00011272_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66024

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2885--2931
16
3.0
16
87
3
60
36
2
21
40
1.65
37688--37752
28
2.3
28
83
0
76
32
12
27
27
1.92
37885--38000
47
2.5
47
85
0
160
26
10
20
42
1.84
39092--39160
20
3.4
20
80
11
77
31
20
17
30
1.95
45783--45823
16
2.6
16
96
0
73
9
14
29
46
1.77
45867--45931
33
2.0
33
93
0
112
10
10
26
52
1.69
45912--45952
17
2.5
17
88
4
57
12
17
24
46
1.82
45903--45987
16
5.2
16
75
2
62
9
14
30
45
1.76
48818--49001
96
2.0
91
93
5
314
36
13
11
38
1.80
50598--50644
22
2.1
23
81
18
55
36
2
8
53
1.44
51549--51573
3
8.3
3
100
0
50
64
0
36
0
0.94
56369--56393
2
12.5
2
100
0
50
48
0
0
52
1.00
58432--58489
21
2.8
20
84
2
71
65
3
3
27
1.25
60012--60092
40
2.0
40
97
0
153
38
17
6
38
1.75
62880--62935
21
2.7
21
88
0
94
33
12
17
35
1.88
63557--63649
48
2.0
48
91
2
152
37
15
24
22
1.93

Tables:   1

The End!