Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005025.1 Hibiscus syriacus cultivar Beakdansim tig00011278_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67190

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6694--6731
19
1.9
20
89
10
60
31
0
0
68
0.90
6694--6737
18
2.2
21
84
11
58
31
0
0
68
0.90
10205--10247
20
2.2
20
87
8
61
76
2
4
16
1.05
13680--13728
25
2.0
25
88
8
73
53
18
4
24
1.62
18533--18591
25
2.5
24
76
13
59
66
0
13
20
1.25
19232--19355
42
3.0
41
67
13
112
55
12
4
27
1.55
21998--22024
8
3.4
8
100
0
54
88
0
0
11
0.50
30598--30644
22
2.1
23
92
4
78
42
10
8
38
1.70
37767--37826
27
2.2
27
79
5
68
28
11
10
50
1.71
42122--42190
27
2.5
28
78
2
77
23
13
17
46
1.83
42439--42467
14
2.1
14
93
6
51
34
24
27
13
1.93
47677--47703
10
2.7
10
100
0
54
66
18
7
7
1.40
48106--48191
28
3.0
28
79
3
91
44
16
17
22
1.87
49002--49090
22
4.0
22
72
12
65
44
3
3
48
1.36
49010--49051
21
2.0
21
90
4
66
35
4
4
54
1.42
50246--50298
19
2.5
22
74
22
60
18
0
3
77
0.92
50243--50292
18
2.7
19
79
11
59
18
0
4
78
0.91
55698--55749
24
2.2
24
82
6
61
40
21
17
21
1.91
56288--56346
18
3.3
18
64
17
50
42
22
0
35
1.54
58393--58520
59
2.2
59
92
0
211
36
18
17
27
1.93
59293--59384
25
3.8
25
88
7
127
34
18
27
19
1.95
62787--62942
24
6.5
24
74
4
109
38
17
19
23
1.93

Tables:   1

The End!