Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005028.1 Hibiscus syriacus cultivar Beakdansim tig00011282_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112525

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7164--7301
20
6.6
20
70
21
79
47
0
6
45
1.34
7160--7373
22
9.6
22
75
13
179
45
0
7
45
1.36
7398--7445
15
3.0
16
77
20
55
45
0
10
43
1.38
7436--7489
20
2.7
20
75
16
58
42
0
3
53
1.18
7476--7508
2
16.0
2
93
6
57
48
0
3
48
1.17
7436--7488
18
2.7
20
74
14
56
43
0
3
52
1.19
10205--10415
105
2.0
102
84
5
269
14
22
24
38
1.91
15328--15480
39
3.9
39
78
3
155
33
20
26
18
1.96
16934--16980
26
1.9
26
83
12
64
25
8
4
61
1.43
17369--17429
26
2.3
27
80
8
70
50
9
8
31
1.65
21488--21589
3
35.3
3
70
21
58
30
2
3
62
1.28
21488--21582
14
6.4
14
73
17
61
29
2
4
64
1.24
21528--21594
25
2.8
25
80
8
77
26
2
2
67
1.20
26312--26340
4
7.2
4
100
0
58
24
0
0
75
0.80
26477--26501
3
8.3
3
100
0
50
0
0
32
68
0.90
26507--26592
13
6.8
12
77
15
66
31
2
1
65
1.13
26501--26599
3
32.3
3
74
11
85
32
3
1
63
1.16
29217--29249
14
2.3
15
89
5
50
24
18
6
51
1.68
29509--29781
139
2.0
139
84
5
365
31
11
13
42
1.80
30517--30572
24
2.2
26
84
6
80
42
10
16
30
1.82
32777--32806
15
2.0
15
100
0
60
13
26
46
13
1.80
37909--38017
53
2.0
54
91
3
175
45
19
7
27
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48213--48316
43
2.4
42
85
1
127
35
18
23
23
1.95
48204--48418
115
1.9
115
83
5
283
38
19
20
21
1.93
49981--50024
21
2.1
21
100
0
88
43
20
18
18
1.89
57571--57623
23
2.2
24
86
6
72
26
16
24
32
1.97
60972--61057
31
2.8
31
83
3
102
43
11
18
26
1.84
61857--61900
18
2.4
18
100
0
88
36
29
20
13
1.91
63045--63098
2
27.0
2
100
0
108
50
0
0
50
1.00
65212--65242
16
1.9
16
93
0
53
48
0
6
45
1.28
80571--80600
13
2.3
13
100
0
60
16
46
23
13
1.82
80781--80805
6
4.2
6
100
0
50
16
20
16
48
1.82
84961--85064
35
2.9
36
92
2
174
30
14
18
36
1.90
89024--89127
35
3.0
36
87
5
151
31
13
17
37
1.88
104320--104359
21
1.9
21
89
0
62
15
27
25
32
1.95

Tables:   1

The End!