Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01005029.1 Hibiscus syriacus cultivar Beakdansim tig00011284_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 62090
ACGTcount: A:0.33, C:0.16, G:0.17, T:0.34
Found at i:11224 original size:2 final size:2
Alignment explanation
Indices: 11217--11255 Score: 78
Period size: 2 Copynumber: 19.5 Consensus size: 2
11207 ACATACATAC
11217 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
11256 CATGATAAAA
Statistics
Matches: 37, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 37 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:21087 original size:21 final size:21
Alignment explanation
Indices: 21061--21102 Score: 75
Period size: 21 Copynumber: 2.0 Consensus size: 21
21051 CCAGAATGGG
*
21061 GGGAATCGGTACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
21082 GGGAATCGATACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
21103 ATATTCAAAT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.26, C:0.29, G:0.21, T:0.24
Consensus pattern (21 bp):
GGGAATCGATACCCCTTCATA
Found at i:21297 original size:30 final size:31
Alignment explanation
Indices: 21250--21340 Score: 168
Period size: 31 Copynumber: 3.0 Consensus size: 31
21240 AAATTTTGAA
21250 TAAATTCAATT-AAGTCCAAAAA-CATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
21279 TAAATTCAATTCAAGTCCAAAAACCATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
21310 TAAATTCAATTCAAGTCCAAAAACCATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
21341 CCTTAAATTG
Statistics
Matches: 60, Mismatches: 0, Indels: 2
0.97 0.00 0.03
Matches are distributed among these distances:
29 11 0.18
30 11 0.18
31 38 0.63
ACGTcount: A:0.43, C:0.18, G:0.07, T:0.33
Consensus pattern (31 bp):
TAAATTCAATTCAAGTCCAAAAACCATTTTG
Found at i:22215 original size:19 final size:18
Alignment explanation
Indices: 22191--22232 Score: 57
Period size: 18 Copynumber: 2.3 Consensus size: 18
22181 TTATTAATAA
22191 AAAATATAAATAAAATTTT
1 AAAATAT-AATAAAATTTT
* *
22210 AAAATATATTATAATTTT
1 AAAATATAATAAAATTTT
22228 AAAAT
1 AAAAT
22233 TTTCAGATGA
Statistics
Matches: 21, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
18 14 0.67
19 7 0.33
ACGTcount: A:0.60, C:0.00, G:0.00, T:0.40
Consensus pattern (18 bp):
AAAATATAATAAAATTTT
Found at i:25537 original size:22 final size:23
Alignment explanation
Indices: 25501--25549 Score: 73
Period size: 22 Copynumber: 2.2 Consensus size: 23
25491 CATATAATTA
**
25501 TAAATTAGTTTAAAATTCAAAGG
1 TAAATTAGTTTAAAATAAAAAGG
25524 TAAATTA-TTTAAAATAAAAAGG
1 TAAATTAGTTTAAAATAAAAAGG
25546 TAAA
1 TAAA
25550 CTATACTAGT
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
22 17 0.71
23 7 0.29
ACGTcount: A:0.55, C:0.02, G:0.10, T:0.33
Consensus pattern (23 bp):
TAAATTAGTTTAAAATAAAAAGG
Found at i:26904 original size:31 final size:31
Alignment explanation
Indices: 26869--26935 Score: 82
Period size: 31 Copynumber: 2.2 Consensus size: 31
26859 GGTTTAAAAA
*
26869 AAGATATAGCCA-TTCTTGTATTTATTTAATT
1 AAGATATAGCCACTT-TCGTATTTATTTAATT
* * *
26900 AAGATATGGTCACTTTCGTTTTTATTTAATT
1 AAGATATAGCCACTTTCGTATTTATTTAATT
26931 AAGAT
1 AAGAT
26936 GAGGTCATCA
Statistics
Matches: 31, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
31 29 0.94
32 2 0.06
ACGTcount: A:0.31, C:0.09, G:0.12, T:0.48
Consensus pattern (31 bp):
AAGATATAGCCACTTTCGTATTTATTTAATT
Found at i:27161 original size:25 final size:27
Alignment explanation
Indices: 27099--27160 Score: 78
Period size: 27 Copynumber: 2.4 Consensus size: 27
27089 AAAATAAAAA
*
27099 TAAA-AATAAAATATTTTTAAATTAAG
1 TAAATAATAAAATATATTTAAATTAAG
27125 TAAATAATAAAATATATTT-AA-TAAG
1 TAAATAATAAAATATATTTAAATTAAG
*
27150 TTAAT-ATAAAA
1 TAAATAATAAAA
27161 AATTAAGTTA
Statistics
Matches: 33, Mismatches: 2, Indels: 4
0.85 0.05 0.10
Matches are distributed among these distances:
24 6 0.18
25 8 0.24
26 6 0.18
27 13 0.39
ACGTcount: A:0.60, C:0.00, G:0.03, T:0.37
Consensus pattern (27 bp):
TAAATAATAAAATATATTTAAATTAAG
Found at i:37931 original size:64 final size:63
Alignment explanation
Indices: 37814--37958 Score: 177
Period size: 64 Copynumber: 2.3 Consensus size: 63
37804 CATTCATAAG
* * *
37814 TGCATCGATGCATTCC-TTTAAAGAAGAACATCGAATGCCTTTGATGCATCGATGCA-TAGCTAA
1 TGCATCGATGCA-TCCTTTTAAAGAAGAACATCGAATGCATTTGATGCACCGATGCACAAG-TAA
* * * *
37877 TGCATCGATGCATCCTTTTAAAATAATAACATCGAATGCATTTTATGCACCGATGCACAAGTAG
1 TGCATCGATGCATCCTTTT-AAAGAAGAACATCGAATGCATTTGATGCACCGATGCACAAGTAA
37941 TGCATCGATGCATACCTT
1 TGCATCGATGCAT-CCTT
37959 CATTGAAAGA
Statistics
Matches: 71, Mismatches: 7, Indels: 6
0.85 0.08 0.07
Matches are distributed among these distances:
62 3 0.04
63 15 0.21
64 47 0.66
65 6 0.08
ACGTcount: A:0.32, C:0.21, G:0.17, T:0.30
Consensus pattern (63 bp):
TGCATCGATGCATCCTTTTAAAGAAGAACATCGAATGCATTTGATGCACCGATGCACAAGTAA
Found at i:38688 original size:29 final size:30
Alignment explanation
Indices: 38631--38693 Score: 83
Period size: 29 Copynumber: 2.1 Consensus size: 30
38621 AAGGAACATA
* *
38631 TGGATAGTTGCCGAGGATCTTTATGACCTC
1 TGGATAGTTACCGAGGATCTTTATAACCTC
* *
38661 TGGATAGTTACCG-GGTTCTTTGTAACCTC
1 TGGATAGTTACCGAGGATCTTTATAACCTC
38690 TGGA
1 TGGA
38694 CAGGTCCTTC
Statistics
Matches: 29, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
29 17 0.59
30 12 0.41
ACGTcount: A:0.19, C:0.19, G:0.27, T:0.35
Consensus pattern (30 bp):
TGGATAGTTACCGAGGATCTTTATAACCTC
Found at i:41617 original size:41 final size:40
Alignment explanation
Indices: 41569--41659 Score: 105
Period size: 41 Copynumber: 2.2 Consensus size: 40
41559 ATATTTATAG
*
41569 TAATATATTGATAATTAT-TTATTATA-TTTAAATGATTAAA
1 TAATATATT--TAATTATATTATTATATTTTAAATAATTAAA
* * *
41609 TTAATATATTTTATTATATTTTTATATTTTTAATAATTAAA
1 -TAATATATTTAATTATATTATTATATTTTAAATAATTAAA
41650 TAATATATTT
1 TAATATATTT
41660 TAACAATATA
Statistics
Matches: 44, Mismatches: 4, Indels: 5
0.83 0.08 0.09
Matches are distributed among these distances:
39 6 0.14
40 17 0.39
41 21 0.48
ACGTcount: A:0.42, C:0.00, G:0.02, T:0.56
Consensus pattern (40 bp):
TAATATATTTAATTATATTATTATATTTTAAATAATTAAA
Found at i:41654 original size:40 final size:41
Alignment explanation
Indices: 41584--41661 Score: 115
Period size: 40 Copynumber: 1.9 Consensus size: 41
41574 TATTGATAAT
*
41584 TATTTATTATATTTAAATGATTAAATTAATATATTTTATTA
1 TATTTATTATATTTAAATAATTAAATTAATATATTTTATTA
*
41625 TATTT-TTATATTTTTAATAATTAAA-TAATATATTTTA
1 TATTTATTATA-TTTAAATAATTAAATTAATATATTTTA
41662 ACAATATAAA
Statistics
Matches: 34, Mismatches: 2, Indels: 3
0.87 0.05 0.08
Matches are distributed among these distances:
40 17 0.50
41 17 0.50
ACGTcount: A:0.41, C:0.00, G:0.01, T:0.58
Consensus pattern (41 bp):
TATTTATTATATTTAAATAATTAAATTAATATATTTTATTA
Found at i:41671 original size:22 final size:21
Alignment explanation
Indices: 41631--41675 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
41621 ATTATATTTT
*
41631 TATATTTTTAATAATTAAATAA
1 TATATTTTTAACAATTAAA-AA
41653 TATA-TTTTAACAATATAAAAA
1 TATATTTTTAACAAT-TAAAAA
41674 TA
1 TA
41676 AAAATTCTTA
Statistics
Matches: 21, Mismatches: 1, Indels: 3
0.84 0.04 0.12
Matches are distributed among these distances:
21 13 0.62
22 8 0.38
ACGTcount: A:0.53, C:0.02, G:0.00, T:0.44
Consensus pattern (21 bp):
TATATTTTTAACAATTAAAAA
Found at i:44903 original size:15 final size:15
Alignment explanation
Indices: 44861--44904 Score: 52
Period size: 15 Copynumber: 2.9 Consensus size: 15
44851 ATGGCACCGA
*
44861 AAGCTGAGAAGAAAC
1 AAGCTGAGAAGAAGC
*
44876 AAGCGGAGAAGAAGC
1 AAGCTGAGAAGAAGC
* *
44891 CAGCTGAGGAGAAG
1 AAGCTGAGAAGAAG
44905 AAGACCGTCG
Statistics
Matches: 24, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
15 24 1.00
ACGTcount: A:0.45, C:0.14, G:0.36, T:0.05
Consensus pattern (15 bp):
AAGCTGAGAAGAAGC
Found at i:47323 original size:14 final size:14
Alignment explanation
Indices: 47306--47332 Score: 54
Period size: 14 Copynumber: 1.9 Consensus size: 14
47296 AATTAAATTA
47306 TTAGAATTTATTTC
1 TTAGAATTTATTTC
47320 TTAGAATTTATTT
1 TTAGAATTTATTT
47333 AAATAGTTTT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 13 1.00
ACGTcount: A:0.30, C:0.04, G:0.07, T:0.59
Consensus pattern (14 bp):
TTAGAATTTATTTC
Found at i:50680 original size:83 final size:82
Alignment explanation
Indices: 50583--51020 Score: 415
Period size: 83 Copynumber: 5.3 Consensus size: 82
50573 CATGTCATAG
* * * *
50583 TGTTTTCCATTATTATTTAGAGAATATATTCCATGTCATAGCGTTTTC-TCCCATCTGAAATGAA
1 TGTTTTCCATTATTATTCAGAGAATATCTTCCATGTCATAGTG-TTTCATCCCATCTAAAATGAA
**
50647 AGGCGAATTCCAGGAGAAA
65 AGGCGCGTTCCAGG-GAAA
* * * *
50666 TGTTTTCCATTATTATTCAGAGAATCTCTAT-CATGTTATAGTGTTCCATCCCATCCAAAATGAA
1 TGTTTTCCATTATTATTCAGAGAATATCT-TCCATGTCATAGTGTTTCATCCCATCTAAAATGAA
***** *
50730 AAATTTGTTCCAGGGAAG
65 AGGCGCGTTCCAGGGAAA
* * * * *
50748 TATTTTCCATTATTATTCAGAGAAT-TTTTGCCATGTCATAGTGTTCCATTCCAT-TCGAAATGA
1 TGTTTTCCATTATTATTCAGAGAATATCTT-CCATGTCATAGTGTTTCATCCCATCT-AAAATGA
* *
50811 AAGGGGCGTTCTAGGGGAAA
64 AAGGCGCGTTCCA-GGGAAA
* * * *
50831 TGTTTTTCATTATTATTCAGAGAATATCTACCATGTCATAATG-TTCTATCCCATCCAAAATGAA
1 TGTTTTCCATTATTATTCAGAGAATATCTTCCATGTCATAGTGTTTC-ATCCCATCTAAAATGAA
* *
50895 AGGTGC-ATCCTAGGGAAA
65 AGGCGCGTTCC-AGGGAAA
*
50913 GTGTTTTCCATTATTATTCAGAGAATCTCTAT-CATGTCATAGTGTTTCATCCCAT-TCAAAATG
1 -TGTTTTCCATTATTATTCAGAGAATATCT-TCCATGTCATAGTGTTTCATCCCATCT-AAAATG
50976 AAAGGCGCGTTCCAGGGGAAA
63 AAAGGCGCGTTCCA-GGGAAA
** *
50997 CATTTTCCATTATTATTTAGAGAA
1 TGTTTTCCATTATTATTCAGAGAA
51021 AATTTACAGT
Statistics
Matches: 289, Mismatches: 50, Indels: 32
0.78 0.13 0.09
Matches are distributed among these distances:
80 1 0.00
81 2 0.01
82 74 0.26
83 197 0.68
84 15 0.05
ACGTcount: A:0.30, C:0.17, G:0.17, T:0.36
Consensus pattern (82 bp):
TGTTTTCCATTATTATTCAGAGAATATCTTCCATGTCATAGTGTTTCATCCCATCTAAAATGAAA
GGCGCGTTCCAGGGAAA
Found at i:50884 original size:165 final size:165
Alignment explanation
Indices: 50585--51020 Score: 533
Period size: 165 Copynumber: 2.6 Consensus size: 165
50575 TGTCATAGTG
* * *
50585 TTTTCCATTATTATTTAGAGAATATATTCCATGTCATAGCGTTTTC-TCCCA-TCTGAAATGAAA
1 TTTTCCATTATTATTCAGAGAAT-TTTTCCATGTCATAGTG-TTTCATCCCATTC-GAAATGAAA
** * * * * *
50648 GGCGAATTCCAGGAGAAATGTTTTCCATTATTATTCAGAGAATCTCTATCATGTTATAGTGTTCC
63 GGCGCGTTCCAGGGGAAATGTTTTCCATTATTATTCAGAGAATATCTACCATGTCATAATGTTCC
** *
50713 ATCCCATCCAAAATGAAAAATTTG-TTCC-AGGG-AAGTA
128 ATCCCATCCAAAATG--AAAGGTGCATCCTAGGGAAAGTA
* *
50750 TTTTCCATTATTATTCAGAGAATTTTTGCCATGTCATAGTGTTCCATTCCATTCGAAATGAAAGG
1 TTTTCCATTATTATTCAGAGAATTTTT-CCATGTCATAGTGTTTCATCCCATTCGAAATGAAAGG
* * * *
50815 GGCGTTCTAGGGGAAATGTTTTTCATTATTATTCAGAGAATATCTACCATGTCATAATGTTCTAT
65 CGCGTTCCAGGGGAAATGTTTTCCATTATTATTCAGAGAATATCTACCATGTCATAATGTTCCAT
*
50880 CCCATCCAAAATGAAAGGTGCATCCTAGGGAAAGTG
130 CCCATCCAAAATGAAAGGTGCATCCTAGGGAAAGTA
* *
50916 TTTTCCATTATTATTCAGAGAATCTCTAT-CATGTCATAGTGTTTCATCCCATTCAAAATGAAAG
1 TTTTCCATTATTATTCAGAGAAT-T-TTTCCATGTCATAGTGTTTCATCCCATTCGAAATGAAAG
** *
50980 GCGCGTTCCAGGGGAAACATTTTCCATTATTATTTAGAGAA
64 GCGCGTTCCAGGGGAAATGTTTTCCATTATTATTCAGAGAA
51021 AATTTACAGT
Statistics
Matches: 233, Mismatches: 30, Indels: 15
0.84 0.11 0.05
Matches are distributed among these distances:
163 5 0.02
164 9 0.04
165 120 0.52
166 96 0.41
167 1 0.00
168 2 0.01
ACGTcount: A:0.31, C:0.17, G:0.17, T:0.36
Consensus pattern (165 bp):
TTTTCCATTATTATTCAGAGAATTTTTCCATGTCATAGTGTTTCATCCCATTCGAAATGAAAGGC
GCGTTCCAGGGGAAATGTTTTCCATTATTATTCAGAGAATATCTACCATGTCATAATGTTCCATC
CCATCCAAAATGAAAGGTGCATCCTAGGGAAAGTA
Found at i:51953 original size:18 final size:18
Alignment explanation
Indices: 51926--51998 Score: 101
Period size: 18 Copynumber: 3.9 Consensus size: 18
51916 ACTGAATATT
51926 TGTCCCGAAGGACCACTA
1 TGTCCCGAAGGACCACTA
*
51944 TGTCCTGAAGGACCACTGA
1 TGTCCCGAAGGACCACT-A
* *
51963 TTGTTCCGAAGAACCACTA
1 -TGTCCCGAAGGACCACTA
51982 TGTCCCGAAGGACCACT
1 TGTCCCGAAGGACCACT
51999 GTTTGTCTCG
Statistics
Matches: 47, Mismatches: 6, Indels: 4
0.82 0.11 0.07
Matches are distributed among these distances:
18 31 0.66
19 2 0.04
20 14 0.30
ACGTcount: A:0.27, C:0.30, G:0.22, T:0.21
Consensus pattern (18 bp):
TGTCCCGAAGGACCACTA
Found at i:51973 original size:38 final size:38
Alignment explanation
Indices: 51925--52018 Score: 127
Period size: 38 Copynumber: 2.5 Consensus size: 38
51915 CACTGAATAT
* *
51925 TTGTCCCGAAGGACCACTATGTCCTGAAGGACCACTGA
1 TTGTTCCGAAGGACCACTATGTCCCGAAGGACCACTGA
* *
51963 TTGTTCCGAAGAACCACTATGTCCCGAAGGACCACTGT
1 TTGTTCCGAAGGACCACTATGTCCCGAAGGACCACTGA
*
52001 TTG-TCTCGAATGACCACT
1 TTGTTC-CGAAGGACCACT
52019 GATAATCCCT
Statistics
Matches: 49, Mismatches: 6, Indels: 2
0.86 0.11 0.04
Matches are distributed among these distances:
37 2 0.04
38 47 0.96
ACGTcount: A:0.26, C:0.29, G:0.21, T:0.24
Consensus pattern (38 bp):
TTGTTCCGAAGGACCACTATGTCCCGAAGGACCACTGA
Found at i:51978 original size:20 final size:20
Alignment explanation
Indices: 51925--52021 Score: 89
Period size: 18 Copynumber: 5.0 Consensus size: 20
51915 CACTGAATAT
*
51925 TTGTCCCGAAGGACCACT-A
1 TTGTTCCGAAGGACCACTGA
51944 -TG-TCCTGAAGGACCACTGA
1 TTGTTCC-GAAGGACCACTGA
*
51963 TTGTTCCGAAGAACCACT-A
1 TTGTTCCGAAGGACCACTGA
* *
51982 -TGTCCCGAAGGACCACTGT
1 TTGTTCCGAAGGACCACTGA
*
52001 TTG-TCTCGAATGACCACTGA
1 TTGTTC-CGAAGGACCACTGA
52021 T
1 T
52022 AATCCCTCGA
Statistics
Matches: 63, Mismatches: 8, Indels: 13
0.75 0.10 0.15
Matches are distributed among these distances:
17 2 0.03
18 28 0.44
19 3 0.05
20 27 0.43
21 3 0.05
ACGTcount: A:0.26, C:0.28, G:0.22, T:0.25
Consensus pattern (20 bp):
TTGTTCCGAAGGACCACTGA
Found at i:60285 original size:2 final size:2
Alignment explanation
Indices: 60280--60361 Score: 137
Period size: 2 Copynumber: 41.0 Consensus size: 2
60270 TGATGTGTGA
*
60280 AT AT AT AT AT AT AT AT AT AT AT AT AT AT CT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
* *
60322 AT AT AT AT AT CT AT AT AT AT AT AT AT AT AT AT AT GT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
60362 GATTTATGTA
Statistics
Matches: 74, Mismatches: 6, Indels: 0
0.93 0.08 0.00
Matches are distributed among these distances:
2 74 1.00
ACGTcount: A:0.46, C:0.02, G:0.01, T:0.50
Consensus pattern (2 bp):
AT
Found at i:60621 original size:22 final size:22
Alignment explanation
Indices: 60573--60622 Score: 55
Period size: 22 Copynumber: 2.3 Consensus size: 22
60563 GAGTCTACGC
60573 GGTCCTTCAGGACATATACACA
1 GGTCCTTCAGGACATATACACA
* * * * *
60595 AGTCCTTCGGGATATATGCATA
1 GGTCCTTCAGGACATATACACA
60617 GGTCCT
1 GGTCCT
60623 ACGTGACATA
Statistics
Matches: 22, Mismatches: 6, Indels: 0
0.79 0.21 0.00
Matches are distributed among these distances:
22 22 1.00
ACGTcount: A:0.26, C:0.24, G:0.22, T:0.28
Consensus pattern (22 bp):
GGTCCTTCAGGACATATACACA
Found at i:61082 original size:14 final size:14
Alignment explanation
Indices: 61063--61098 Score: 72
Period size: 14 Copynumber: 2.6 Consensus size: 14
61053 ATGAGAATTT
61063 AGATAAATTAATGG
1 AGATAAATTAATGG
61077 AGATAAATTAATGG
1 AGATAAATTAATGG
61091 AGATAAAT
1 AGATAAAT
61099 AAATAATACA
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 22 1.00
ACGTcount: A:0.53, C:0.00, G:0.19, T:0.28
Consensus pattern (14 bp):
AGATAAATTAATGG
Found at i:61414 original size:7 final size:7
Alignment explanation
Indices: 61402--61426 Score: 50
Period size: 7 Copynumber: 3.6 Consensus size: 7
61392 GAAGTATATG
61402 GATATAA
1 GATATAA
61409 GATATAA
1 GATATAA
61416 GATATAA
1 GATATAA
61423 GATA
1 GATA
61427 GCTGACTATG
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
7 18 1.00
ACGTcount: A:0.56, C:0.00, G:0.16, T:0.28
Consensus pattern (7 bp):
GATATAA
Done.