Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005030.1 Hibiscus syriacus cultivar Beakdansim tig00011286_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93671

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2359--2409
19
2.7
19
90
0
75
35
29
17
17
1.93
3438--3526
25
3.5
25
84
3
81
26
20
21
31
1.98
3483--3532
25
2.0
25
92
0
82
24
24
24
28
2.00
9562--9593
15
2.0
17
88
11
50
43
12
6
37
1.68
10944--10981
19
2.0
19
85
10
51
55
0
5
39
1.23
16389--16449
29
2.1
30
84
3
79
39
3
19
37
1.68
19098--19161
22
2.9
22
90
0
92
39
17
20
23
1.92
22524--22574
20
2.5
20
93
6
86
21
0
35
43
1.53
38239--38291
17
3.1
17
83
0
70
39
15
5
39
1.70
41325--41425
17
5.9
17
70
11
62
37
14
7
39
1.76
41357--41424
17
3.9
18
75
14
63
36
11
8
42
1.73
56551--56596
18
2.6
18
85
0
65
39
10
23
26
1.88
57936--57978
20
2.2
20
82
0
50
48
0
2
48
1.14
58361--58403
20
2.2
20
91
0
68
23
30
23
23
1.99
63555--63605
20
2.5
20
90
0
84
37
13
21
27
1.91
66043--66081
20
2.0
20
84
0
51
20
30
28
20
1.98
69943--69998
22
2.5
22
76
0
67
32
21
23
23
1.98
71914--71955
22
2.0
21
85
4
57
45
7
4
42
1.52
71958--72519
199
2.9
194
79
8
604
47
8
4
39
1.54
74073--74130
23
2.5
23
82
0
80
46
12
27
13
1.79
75891--75942
28
1.9
26
84
7
68
42
0
0
57
0.98
85111--85317
69
3.1
67
76
8
206
43
29
5
21
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85111--85317
66
3.1
66
76
7
202
43
29
5
21
1.75
87611--87656
24
1.9
24
91
8
76
23
2
2
71
1.08
87596--87656
9
7.2
9
72
23
53
22
1
1
73
1.01

Tables:   1

The End!