Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005040.1 Hibiscus syriacus cultivar Beakdansim tig00011313_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42929

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--56
25
2.0
26
82
10
63
44
3
5
46
1.45
1009--1152
29
4.9
28
72
12
76
63
7
8
20
1.47
2911--3768
128
6.7
128
82
3
872
26
17
28
26
1.98
2911--3774
384
2.3
381
82
4
1033
26
18
28
26
1.98
4047--4136
32
2.8
32
77
0
99
30
23
15
31
1.95
5338--5367
2
15.0
2
92
0
51
50
0
3
46
1.18
8550--8663
30
3.7
29
71
16
88
60
7
10
21
1.54
21022--21073
27
2.0
27
84
3
70
28
17
9
44
1.80
26657--26699
22
2.0
20
82
8
50
39
2
18
39
1.64
27521--27546
2
13.0
2
100
0
52
50
0
0
50
1.00
33762--33789
14
2.0
14
100
0
56
42
0
7
50
1.30
40642--40763
49
2.5
48
82
6
154
27
21
13
37
1.90

Tables:   1

The End!