Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005047.1 Hibiscus syriacus cultivar Beakdansim tig00011334_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68266

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
372--543
90
1.9
90
95
0
308
36
12
6
44
1.69
4383--4437
28
2.0
27
85
3
74
12
54
0
32
1.38
4383--4423
14
2.9
14
100
0
82
14
51
0
34
1.43
4737--5410
134
5.0
133
84
5
827
31
18
20
29
1.96
4737--5410
270
2.5
269
87
3
960
31
18
20
29
1.96
6766--6813
7
6.9
7
100
0
96
0
27
0
72
0.84
6742--6862
7
16.3
7
77
14
73
2
21
0
76
0.91
6817--6867
23
2.2
24
86
10
70
5
13
0
80
0.89
6794--6867
23
3.2
23
76
19
66
4
17
0
78
0.90
6731--6869
9
16.1
8
67
21
50
3
19
0
76
0.92
14548--14693
45
3.2
45
84
1
195
25
25
13
36
1.92
14711--15100
67
5.8
67
88
0
537
29
24
15
31
1.95
15305--15418
57
2.0
57
94
0
201
37
18
9
34
1.84
16737--16858
31
3.9
31
94
0
217
23
25
8
42
1.82
23148--23198
3
17.0
3
76
8
50
62
5
1
29
1.29
23162--23192
12
2.6
12
100
0
62
61
6
0
32
1.21
23353--23465
22
5.1
22
77
13
117
41
9
0
48
1.36
23440--23504
16
4.3
15
74
16
55
41
4
0
53
1.21
25167--25200
17
2.0
17
94
0
59
29
20
47
2
1.65
25358--25479
21
5.9
21
69
8
70
28
31
18
20
1.97
28780--28867
33
2.7
30
79
10
86
42
0
1
56
1.06
28874--28908
17
1.9
19
88
11
56
20
0
11
68
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29010--29063
17
3.2
16
78
2
54
37
0
3
59
1.15
34711--34735
12
2.1
12
100
0
50
24
56
0
20
1.43
37097--37129
16
2.1
16
88
11
50
18
6
0
75
1.00
37930--37977
21
2.3
21
88
0
69
25
41
12
20
1.87
37987--38075
42
2.1
42
89
0
133
20
28
24
26
1.99
37982--38092
21
5.3
21
76
8
109
19
27
26
26
1.99
37987--38092
42
2.5
42
85
0
131
19
28
25
26
1.99
38606--38705
34
2.9
34
84
0
128
56
3
3
38
1.30
39118--39584
127
3.7
126
94
2
792
33
21
23
20
1.97
39665--39705
8
5.2
8
82
5
57
36
29
0
34
1.58
65564--65688
64
2.0
63
84
12
166
32
24
16
28
1.96
68105--68129
13
1.9
13
100
0
50
64
0
16
20
1.30

Tables:   1

The End!