Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000505.1 Hibiscus syriacus cultivar Beakdansim tig00000962_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56286

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1375--2141
136
5.7
136
83
4
828
25
16
24
34
1.95
1498--2146
268
2.4
273
84
3
857
26
16
23
34
1.95
8156--8205
24
2.1
24
85
7
66
60
14
2
24
1.45
17183--17232
24
2.1
24
85
7
66
60
14
2
24
1.45
22103--22198
31
3.1
31
80
3
95
38
22
14
23
1.92
27313--27408
31
3.1
31
81
3
113
38
22
15
22
1.92
28171--28231
24
2.5
24
94
0
104
26
24
22
26
2.00
45241--45361
61
2.0
63
83
6
158
31
17
18
33
1.94
45257--45362
32
3.4
32
77
14
114
33
15
16
33
1.90
45994--46032
15
2.6
15
95
0
69
48
12
5
33
1.63
46225--46261
19
1.9
19
100
0
74
21
29
16
32
1.95
50892--50938
3
15.7
3
100
0
94
65
0
0
34
0.93
51582--51617
18
2.0
18
94
0
63
19
22
33
25
1.97
51731--51758
2
14.0
2
100
0
56
50
0
0
50
1.00
54948--55006
29
2.0
29
100
0
118
33
16
25
23
1.96

Tables:   1

The End!