Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005050.1 Hibiscus syriacus cultivar Beakdansim tig00011339_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81114

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
263--575
43
7.4
42
83
6
357
33
23
26
16
1.96
3308--3337
13
2.4
13
94
5
53
13
23
50
13
1.77
5141--5285
43
3.4
42
87
3
193
33
23
24
17
1.96
5168--5304
43
3.2
43
86
6
188
32
21
26
19
1.97
5316--5383
28
2.4
27
76
13
66
48
13
7
30
1.69
8110--8149
5
8.0
5
88
0
62
0
17
57
25
1.40
11952--11989
19
2.0
19
94
0
67
36
18
31
13
1.89
13647--13672
7
3.7
7
100
0
52
23
30
30
15
1.95
20747--20814
29
2.3
29
94
0
118
42
16
5
35
1.72
39120--39163
23
1.9
23
86
9
63
47
0
6
45
1.29
49043--49113
24
3.0
24
87
0
97
40
18
15
25
1.89
64128--64215
24
3.7
23
75
6
86
21
13
15
48
1.80
64118--64222
48
2.2
49
88
6
153
20
14
15
49
1.79
68578--68649
24
3.0
24
77
0
72
18
12
16
52
1.74
68558--68649
48
1.9
48
82
4
114
20
14
15
50
1.78
68806--68836
2
15.5
2
100
0
62
48
0
0
51
1.00
77365--77439
38
2.0
38
86
5
107
26
20
18
34
1.95
77619--77650
7
4.6
7
92
0
55
18
25
25
31
1.98
77616--77659
21
2.0
22
91
4
72
18
27
25
29
1.98
77654--77709
29
1.9
29
82
7
69
35
7
16
41
1.75
77714--77769
26
2.1
27
86
6
78
32
1
10
55
1.45
77720--77781
26
2.3
27
83
2
72
35
3
9
51
1.51

Tables:   1

The End!