Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005056.1 Hibiscus syriacus cultivar Beakdansim tig00011350_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63383

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2634--2721
42
2.1
41
93
6
151
42
2
9
46
1.48
13780--13862
23
3.6
23
91
3
114
37
22
10
28
1.88
18910--18976
35
1.9
35
84
6
91
31
20
26
20
1.98
19804--19881
21
3.7
21
70
13
61
25
14
17
42
1.87
19887--19955
21
3.3
21
87
0
93
20
14
28
36
1.92
23233--23297
33
2.0
33
90
0
103
29
13
21
35
1.92
23233--23316
33
2.6
33
84
3
91
26
14
23
35
1.93
25322--25367
2
23.0
2
100
0
92
50
0
0
50
1.00
25832--25887
20
2.6
20
83
11
67
26
23
17
32
1.97
30522--30586
33
2.0
33
93
0
112
29
13
23
33
1.93
47578--47739
63
2.6
63
91
3
245
40
14
12
32
1.83
53031--53168
63
2.2
63
97
0
258
40
11
12
35
1.79
53113--53248
41
3.3
41
96
1
245
41
11
15
32
1.82
60592--60633
21
2.0
21
100
0
84
28
33
14
23
1.94
62552--62612
31
2.0
31
83
6
79
54
3
1
40
1.27
63117--63168
23
2.3
23
86
0
68
11
17
17
53
1.72

Tables:   1

The End!