Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005057.1 Hibiscus syriacus cultivar Beakdansim tig00011351_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64974

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4573--4809
130
1.8
130
82
8
304
41
13
10
33
1.79
7480--7586
42
2.6
41
77
5
117
30
20
21
27
1.98
7704--7744
21
2.0
21
85
0
55
31
29
12
26
1.92
7710--7805
41
2.3
40
78
5
102
34
23
17
23
1.96
12149--12213
27
2.4
28
86
2
96
44
20
12
23
1.84
22020--22056
3
12.3
3
88
0
56
67
2
0
29
1.04
23253--23283
16
1.9
16
93
0
53
35
35
9
19
1.85
27340--27385
23
2.0
23
83
8
58
28
2
4
65
1.23
33311--33398
45
1.9
46
93
2
151
28
19
25
27
1.99
37450--37485
18
2.1
17
89
5
54
52
5
2
38
1.39
43095--43140
17
2.5
19
75
6
51
45
28
6
19
1.75
59149--59194
14
3.3
15
79
14
62
80
0
8
10
0.91
60540--61258
160
4.5
159
91
2
1081
31
17
25
25
1.97
60540--61258
267
2.7
267
91
2
1128
31
17
25
25
1.97
60540--61258
107
6.8
106
90
2
1072
31
17
25
25
1.97
60535--61274
53
13.9
54
86
7
633
31
17
26
25
1.97

Tables:   1

The End!