Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005060.1 Hibiscus syriacus cultivar Beakdansim tig00011360_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36647

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1668--1697
12
2.5
12
94
0
51
13
3
30
53
1.56
2982--3064
29
2.8
29
88
1
130
42
12
13
32
1.81
4469--4513
18
2.5
18
92
0
72
24
15
31
28
1.96
5021--5065
19
2.4
19
96
0
81
44
35
0
20
1.51
6813--6862
23
2.2
23
85
7
66
40
6
24
30
1.79
6777--6938
87
1.9
87
90
0
261
41
9
15
33
1.80
7097--7636
200
2.7
201
85
4
675
29
15
15
39
1.89
10116--10164
19
2.6
19
100
0
98
55
10
0
34
1.34
10093--10164
38
1.9
38
82
2
92
51
15
0
33
1.44
17097--17166
14
5.0
14
100
0
140
50
7
14
28
1.69
19251--19304
26
2.1
26
92
0
90
20
12
31
35
1.90
24164--24220
14
4.1
14
100
0
114
49
8
14
28
1.72
25604--25662
26
2.4
24
80
11
66
22
13
30
33
1.92
25614--25667
26
2.1
26
89
0
81
24
14
27
33
1.94
28070--28156
15
5.7
15
80
10
88
62
12
4
20
1.48
28068--28162
30
3.1
30
83
8
138
62
12
4
21
1.47
29252--29555
42
7.2
42
69
10
170
26
15
8
49
1.73
34709--34737
3
9.7
3
100
0
58
65
0
0
34
0.93
34731--34766
15
2.3
15
95
4
63
44
0
0
55
0.99

Tables:   1

The End!