Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000508.1 Hibiscus syriacus cultivar Beakdansim tig00000967_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47795

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8277--8358
35
2.3
35
85
6
121
31
2
21
43
1.66
11249--11286
20
1.9
20
88
0
58
15
10
42
31
1.81
11316--11355
20
2.0
21
90
5
64
27
20
17
35
1.95
15283--15307
11
2.3
11
100
0
50
64
0
0
36
0.94
24451--24492
3
14.7
3
85
9
61
33
0
0
66
0.92
26298--26354
20
2.7
20
86
10
69
26
22
19
31
1.98
30027--30098
26
2.8
28
87
8
84
43
12
2
41
1.57
30044--30114
26
2.6
28
86
8
110
43
11
2
42
1.55
30446--30483
20
1.9
20
88
0
58
23
18
21
36
1.95
30491--30652
64
2.5
64
81
4
184
23
24
18
33
1.96
34594--34631
20
1.9
20
100
0
76
23
18
21
36
1.95
38719--38756
20
1.9
20
100
0
76
23
18
21
36
1.95
42430--42491
32
1.9
32
86
0
88
17
17
8
56
1.64
42999--43043
19
2.3
20
85
11
67
15
17
11
55
1.68
44323--44374
13
4.0
13
83
16
72
69
9
21
0
1.17
45730--45806
32
2.5
31
78
21
81
33
15
12
37
1.86

Tables:   1

The End!