Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005081.1 Hibiscus syriacus cultivar Beakdansim tig00011410_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71514

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
433--950
176
2.9
180
87
8
737
27
20
20
31
1.98
2058--2170
35
3.2
34
71
13
95
30
18
7
43
1.79
2223--2380
39
3.8
39
68
21
104
28
18
13
38
1.90
2294--2608
105
3.1
103
86
5
417
31
19
11
37
1.87
2502--2583
35
2.4
35
85
2
112
25
20
15
37
1.93
2781--3404
105
6.0
105
87
4
851
34
26
16
21
1.95
3939--4042
37
2.8
37
83
1
129
41
14
14
29
1.85
4391--4428
17
2.2
17
86
9
51
26
5
2
65
1.27
4909--5012
39
2.6
39
78
14
106
26
5
0
67
1.13
9187--9317
67
2.0
67
90
0
208
23
11
22
41
1.86
9545--9594
21
2.4
21
93
0
82
28
18
20
34
1.95
26744--26848
41
2.6
41
78
6
115
27
23
19
29
1.98
28616--28743
65
2.0
64
83
7
161
29
23
17
29
1.97
28750--28803
19
2.8
19
100
0
108
22
33
22
22
1.97
42114--42188
25
3.0
25
100
0
150
24
4
28
44
1.72
47010--47044
3
11.7
3
100
0
70
68
0
0
31
0.90
48611--48636
7
3.7
7
100
0
52
0
15
42
42
1.47
51606--51654
12
3.9
13
72
20
50
22
18
20
38
1.93
55772--56197
110
3.9
110
84
3
552
33
17
17
32
1.93
60553--60607
27
2.1
26
89
3
83
45
9
12
32
1.74
67130--67546
109
3.9
107
81
8
447
33
16
17
32
1.92
67130--67546
213
1.9
218
85
6
573
33
16
17
32
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69460--69490
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!