Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005096.1 Hibiscus syriacus cultivar Beakdansim tig00011459_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58192

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5579--5604
12
2.2
12
100
0
52
23
42
34
0
1.54
8591--8643
2
26.5
2
96
0
97
47
0
1
50
1.12
8881--8933
9
5.6
9
75
20
54
9
7
0
83
0.83
12152--12199
24
2.0
24
95
0
87
37
6
20
35
1.78
12411--12445
14
2.4
14
90
4
52
34
0
2
62
1.10
17288--17323
15
2.4
15
86
13
56
8
11
13
66
1.44
20282--20311
6
5.0
6
100
0
60
16
0
33
50
1.46
34610--34790
43
4.3
42
83
6
197
23
18
23
34
1.96
41287--41378
40
2.2
41
83
7
107
38
22
14
25
1.92
44646--44679
17
2.0
17
88
0
50
50
2
2
44
1.32
45026--45074
24
2.1
23
84
3
62
44
2
0
53
1.12
45163--45199
17
2.2
17
90
0
56
67
2
0
29
1.04
49149--49182
9
3.8
9
84
0
50
20
0
11
67
1.21
49154--49188
18
1.9
18
94
0
61
17
0
14
68
1.21
49149--49185
15
2.5
15
90
0
56
18
0
13
67
1.23

Tables:   1

The End!